Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60426g00030 | ATGGGCAACTGCTGCAGATCTCCGGCCGCCGTCGCCCGCGAGGACGTCAAATCCAGCTTCTCTGACCATCACGCTAAGCGCGCCGCTGCTGGAGACTCCTCCGCCGCCGGAGGCACCGGTGGGAAGAAGAAGCCTCCTCCGATCACCGTCCTAACCGGCGTGCCCAAAGAGAACATCGAGGACCGGTACCTGGTGGACCGCGAGCTCGGCCGTGGCGAGTTCGGAGTGACATACCTCTGCATCGACCGCGAGACGCGCGAGCTGCTCGCGTGCAAGAGCATCTCGAAGCGGAAGCTCCGCACGGCCGTGGACGTTGAGGACGTCCGCCGCGAGGTGGCGATCATGCGCCACCTGCCGCGGAGCCCGTCCATCGTGTCGCTCCGGGAGGCCTGCGAGGACGACAATGCAGTCCATCTCGTGATGGAGCTGTGTGAGGGCGGCGAGCTCTTTGACCGCATCGTTGCCAGGGGTCATTACACGGAGAGGGCGGCCGCAGCAGTTGCACGGACCATCGTGGAAGTAGTGCAGCTTTGCCACAAGCACGGGGTGATCCACAGGGACCTCAAGCCAGAGAATTTCTTGTTTGCTAACAAGAAGGAGAACTCGCCTCTCAAGGCTATCGATTTTGGGTTGTCCATATTCTTCAAGCAAGGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCTTATTATATGGCTCCAGAGGTGCTCAAGAGAAACTATGGGCCAGAGATAGATATATGGAGTGCGGGAGTGATTCTCTATATCTTATTGTGTGGTGTTCCCCCATTTTGGGCCGAATCTGAACAAGGGGTTGCACAAGCCATTCTTCGAGGGCTGATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTAGGCAAATGTTAGAACCAGACCCTAAGCTTCGATTAACTGCCAAACAAGTGCTCGAGCATCCTTGGCTACAAAATGCTAAAAAGGCTCCTAATGTTCCTCTTGGAGATGTTGTTAAATCAAGGCTTAAGCAGTTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTATCTAATGAAGAAGTTGAAGACATCAAAGATATGTTCAAGAAAATGGACAGTGATAATGATGGTATTGTTTCCATTGAAGAATTGAAAGCTGGATTTCGAAATTTTGGATTCCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAGGCTGTAGATAATAACGGGAAGGGAACACTTGACTATGGAGAATTTGTTGCTGTTTCTCTTCATTTAAAAAGGATGGCTAATGATGAGCATCTTCGCAAGGCCTTCTCATATTTTGACAAGGATGGGAATGGATATATTGAACCTGAAGAGCTACGAAATGCATTAATGGAAGATGGAGATGATTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACGGACAAGGATGGACGTATCAGCTATGATGAGTTTGTGGCTATGATGAAAACTGGAACGGATTGGCGGAAAGCATCTAGGCATTATTCCCGCGGTAGATTCAACAGCTTGAGCTTGAAATTGATGAAAGATGGTTCCTTAAACTTAGGAAATGAACCATTATCTTGA | 1620 | 0.4883 | MGNCCRSPAAVAREDVKSSFSDHHAKRAAAGDSSAAGGTGGKKKPPPITVLTGVPKENIEDRYLVDRELGRGEFGVTYLCIDRETRELLACKSISKRKLRTAVDVEDVRREVAIMRHLPRSPSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKQGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDSDNDGIVSIEELKAGFRNFGFQLAESEVQMFIEAVDNNGKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPEELRNALMEDGDDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNEPLS | 539 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60426g00030 | 539 | CDD | EFh | 440 | 501 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | ProSitePatterns | EF-hand calcium-binding domain. | 484 | 496 | IPR018247 | - | |
Stsc60426g00030 | 539 | ProSitePatterns | EF-hand calcium-binding domain. | 377 | 389 | IPR018247 | - | |
Stsc60426g00030 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 474 | 506 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 56 | 496 | - | - | |
Stsc60426g00030 | 539 | FunFam | calcium-dependent protein kinase 13 | 149 | 329 | - | - | |
Stsc60426g00030 | 539 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 92 | IPR017441 | GO:0005524 | |
Stsc60426g00030 | 539 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 183 | 195 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc60426g00030 | 539 | Gene3D | Phosphorylase Kinase; domain 1 | 64 | 148 | - | - | |
Stsc60426g00030 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 364 | 399 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 329 | - | - | |
Stsc60426g00030 | 539 | MobiDBLite | consensus disorder prediction | 15 | 49 | - | - | |
Stsc60426g00030 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 436 | 471 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | SMART | serkin_6 | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60426g00030 | 539 | ProSiteProfiles | Protein kinase domain profile. | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60426g00030 | 539 | FunFam | Calcium-dependent protein kinase 7 | 330 | 504 | - | - | |
Stsc60426g00030 | 539 | CDD | STKc_CAMK | 62 | 320 | - | - | |
Stsc60426g00030 | 539 | FunFam | Calcium-dependent protein kinase 1 | 65 | 148 | - | - | |
Stsc60426g00030 | 539 | Gene3D | - | 330 | 504 | - | - | |
Stsc60426g00030 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 400 | 435 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | Pfam | Protein kinase domain | 65 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60426g00030 | 539 | ProSitePatterns | EF-hand calcium-binding domain. | 449 | 461 | IPR018247 | - | |
Stsc60426g00030 | 539 | SMART | efh_1 | 368 | 396 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | SMART | efh_1 | 404 | 432 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | SMART | efh_1 | 475 | 503 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | SMART | efh_1 | 440 | 468 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | SUPERFAMILY | EF-hand | 350 | 527 | IPR011992 | - | |
Stsc60426g00030 | 539 | Pfam | EF-hand domain pair | 439 | 501 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | Pfam | EF-hand domain pair | 367 | 427 | IPR002048 | GO:0005509 | |
Stsc60426g00030 | 539 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 346 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60426g00030 | Stsc-Chr60426 | 212435 | 217415 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60426g00030 | 1 | 533 | EF-hand Containing Proteins | AT1G74740 | 68.539 | 0.0 | 752 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Stsc60426g00030 | Pkinase | 1.5e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60426g00030 | K13412 | - | gmx:100783922 | 986.097 |