Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60426g00020 ATGACGATAACACTATTGCTAATATCACACTCTTATACAACTCCTCCGGATCCGTTTAAGCTTGTTCAAAGTTGCAGCAATGTGGCCAGTGTGGAAGCGATGATGATCATGGACATTTCGCCTGTTTCTGTAATCATGGAGTTCATTCCAATTCTTGTTCAGACTGCTATAGGTGCAACAACAGCTGGTGTTGGAATTGTTGTAGTATTTGCTGTGAGATACTTCAGTTTAGCACAAAGGAGGTTAACTTTTAAGAAAACAGGGGAATCTGATGATGACCAGAATGTGGAGGATTTCATCACAACTTATGGCTTTCTAGCCCCAAAGATGTATAATTATTCAGAAGTGAAGAAAATCACAAATTCATTTTGTGATCAATTAGGCAAAGGAGGATATGGTGTTGTGTACAAAAGAAAGTTATCTGATGGCTGTCTTGTTGCAGTGAAAGTGATAAACGAATCAAAAGGAAGCGGAGAAGAATTCATAAATGAAGTTTCTAGTATCAGTAGAAGGTCTCATGTGAACATTGTCTCATTTTTGGGATTTTGTAATGAAAGAAATAAAAGAGCACTTATTTATGAGTTCGTCTTTAATAGCTCATTGGATAAGTTCTTCTATGATAGTGGATCATCAACTCTTACCTGCAATTTGGATTGA 657 0.3683 MTITLLLISHSYTTPPDPFKLVQSCSNVASVEAMMIMDISPVSVIMEFIPILVQTAIGATTAGVGIVVVFAVRYFSLAQRRLTFKKTGESDDDQNVEDFITTYGFLAPKMYNYSEVKKITNSFCDQLGKGGYGVVYKRKLSDGCLVAVKVINESKGSGEEFINEVSSISRRSHVNIVSFLGFCNERNKRALIYEFVFNSSLDKFFYDSGSSTLTCNLD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60426g00020 218 Pfam Protein tyrosine and serine/threonine kinase 124 212 IPR001245 GO:0004672|GO:0006468
Stsc60426g00020 218 ProSiteProfiles Protein kinase domain profile. 121 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60426g00020 218 PANTHER RUST RESISTANCE KINASE LR10-RELATED 93 206 IPR045874 GO:0004672
Stsc60426g00020 218 Gene3D Phosphorylase Kinase; domain 1 92 195 - -
Stsc60426g00020 218 SUPERFAMILY Protein kinase-like (PK-like) 99 210 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60426g00020 Stsc-Chr60426 105122 106135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60426g00020 92 204 Receptor kinase-like Gene Family AT5G38280 61.404 4.68e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc60426g00020 PK_Tyr_Ser-Thr 7.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60426g00020 - - aip:107635702 249.595