Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60426g00019 ATGTCTCAAGCACCAAATGCAAAACATCGTTGTTTCTCTGGTTTCTTGCACACCCTTCTTTGTGATGGAAATGGAAACATTTCTGATCAAATCATTGAGTCATATGAGACACATCAAGTGCATCCAAGAAAGAGTGCAATGGTTAATGCAGCTTCTACACCAGGATTGATAGTAAGGTTAATGGGGTTAGATTCAATGCCGAATAATCCCAACTCGGAATTTAAAGAAACCATCCCAGATTCTGTTCCAAGGAGCAAATCAATGAACTTTTTGGATTACATATTGGAGTTTGATGATGCAAGCCAATCTAACCATCGCCGAGCGAAAATCTCGGCTTCATCCCGGGAGGTTCCTGAATTGTTTCGGCGCAAGAACCGCCGCGAAGTTCTCGTGCCGTGTTGGGACAGTGGAAGAAGAGACAGTAAGGAAGGGAAGAGCAGGAAAATTTGCAAGTTGAAAAATGAGCCAAGAATTGTAAAGAATGGTTGTTCAAAGTTTGGAAGAAGTTACAAAGATTCTAATAGCAGTCACAGAAAAAGTGATTGTGGATCAAGGTCAAGCACTAGAATGAAAAATAAGCAGATTGAAGAACTCTTTGAACCAAAGCAGATGAAAAATATGAGAATGCAATGGTCAAAAAAGAAGATAGAGATTGAATATAGCTCACAAGATCTTACCTCAGTTTCAATCCTAGACATCAATGACTATAAGTACCTCTATGGACCTGATTTTCTAGATTACACAAGGCCCTTAATGTCAGCAACAATGTGGGAATCTTCAGAGAAACAGTTCTTGGGCAATGGAATTGAAGACAGAGCAATGAAAGATAAAGGCTACACCTATCCCTACATCCATAAGGAACAAAAAGAGTGTCCCTCAGAATTAGAGATGAAGCTTTTCAACTTAATTGAAAATGATATGAAGGATTTATATTTCACAAAGAAGGGAATGTGTGAGGCTGAAAGGTTTGAGGAGATTGGTTTGGTGTATGAGCATCACATTTTTAACACTTTGCTGCATGAAATTGTGAACGAGCTTGTAGAAACATTCTAG 1053 0.3894 MSQAPNAKHRCFSGFLHTLLCDGNGNISDQIIESYETHQVHPRKSAMVNAASTPGLIVRLMGLDSMPNNPNSEFKETIPDSVPRSKSMNFLDYILEFDDASQSNHRRAKISASSREVPELFRRKNRREVLVPCWDSGRRDSKEGKSRKICKLKNEPRIVKNGCSKFGRSYKDSNSSHRKSDCGSRSSTRMKNKQIEELFEPKQMKNMRMQWSKKKIEIEYSSQDLTSVSILDINDYKYLYGPDFLDYTRPLMSATMWESSEKQFLGNGIEDRAMKDKGYTYPYIHKEQKECPSELEMKLFNLIENDMKDLYFTKKGMCEAERFEEIGLVYEHHIFNTLLHEIVNELVETF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60426g00019 350 PANTHER OS05G0128300 PROTEIN 1 349 - -
Stsc60426g00019 350 MobiDBLite consensus disorder prediction 171 191 - -
Stsc60426g00019 350 Pfam DUF761-associated sequence motif 53 69 IPR032795 -
Stsc60426g00019 350 MobiDBLite consensus disorder prediction 169 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60426g00019 Stsc-Chr60426 103310 104653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60426g00019 1 117 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 29.139 2.57e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60426g00019 - - aip:107626941 496.123