Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60426g00003 ATGGCTGATGCGAATGCCGCCTTGTTCGCCGCCTTCCTCGAAGACTGGATGCTTCGCCAGAGAACCTACCTCCGAGAGCTTCGTTCTGCACAGCAACACCGTGAAGAACTTGGAGATTCCGATAACAGGGAACTCATAAACAGAGTACTCTGTCACTACGACCAATACTACCAAGAGAAATCAAGAATGGCGCAGCGCGATATCTTCTTAGTGTTCTCGCCGCCGTGGTTCAGTTCCTTGGAGAGGACGTTCCTATGGATCGCCGGATTCAAGCCGGCGAAGGCGTTTCACCTCGTGAACCAGGTGGTTCGCGACTTGAGCGAGGAACAACGCCACATGCTGAGCCAGCTCAGCATGGACACGAGGATGAAGGAGAAAGACCTCAACGACGAGCTCGCGAAGACTCACGAGAGCCTCGCGAACTCGCCGCTGATCGAGACGGCGAGAAGCCACGGCAGGGCGTGTCTGGACCGCACGAGACAGCGGTCCAGGCACACCCGGGAGATTGAAATTGAAAGAGAAGAAGAAGGTAGAGTAGCGAGGGAGCTGGAGGTGGCAATGGAGAGCATTGTGGCGAGTGCGGATGAATTGAGGACGAATACGGCATTGGGTGTACTGCAGATATTGAGGGCGGATCAGGCAGTTACTTTCTTGGCAGATGTTGCTGAGCTTCAGCTCAAGATCAGATGTGGGATGAATAGGAGTAAGGAGTTGTTGGCAAATGATGAGGGCATGCATGTGCATGCTTTGGCTTCAAGCTAA 762 0.5381 MADANAALFAAFLEDWMLRQRTYLRELRSAQQHREELGDSDNRELINRVLCHYDQYYQEKSRMAQRDIFLVFSPPWFSSLERTFLWIAGFKPAKAFHLVNQVVRDLSEEQRHMLSQLSMDTRMKEKDLNDELAKTHESLANSPLIETARSHGRACLDRTRQRSRHTREIEIEREEEGRVARELEVAMESIVASADELRTNTALGVLQILRADQAVTFLADVAELQLKIRCGMNRSKELLANDEGMHVHALASS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60426g00003 253 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Stsc60426g00003 253 ProSiteProfiles DOG1 domain profile. 6 238 IPR025422 GO:0006351|GO:0043565
Stsc60426g00003 253 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 9 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60426g00003 Stsc-Chr60426 30048 31275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60426g00003 6 142 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 31.387 4.63e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60426g00003 - - adu:107484978 312.768