Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60425g00028 ATGGCTTCTCTACTCCCTCCAACTCCAACTGTCACTTCCACAATCCAACAGCATTGTTGTTATTATAACAACATTAATAATTTGCATAACAACCAAATAGCGGCAATCTGCTGCTTCTCCCCTCCTCACAAAAAACTACTCCCCATCACTTCAAAATGGAAGAGCAGGAGGGGCCTTATCAGGTGCGACGCTTTCTTTGATGACGTGGCAACCGGTTTGTTGGAGCTGGAGAATGCTCCTTACTTTCAAGGCTTATCGGAGTCGCAGCGGTGGTCGATAGTGGCTTTTGGCGGCCTCGCTTGGATTTATCTCACTGCAAGGCCCGGTGTTCTCCTCGGCGCCATCGATGCATACCTTCTCGCTCCTCTTCAGCTCGCGTTCGACAGTTTCTCCGGAAGGAGGAACCTCAAGAGGACTGATTTTCTCGTGGGAGAAAAGCTCGGCGAGGGCTCCTTCGGTGTTGTGTACTCCGGTGTTCTCCTTCCAAAAAATCTCAACGACGCGCCGGACCAGAGCAGGACACGACGGAGGCCGAGGCCTCAGCCTCCGCCTGCTCTTGTTGTTGCCAAGTCCCAACCTAAGGACAAAGTCATTCTTAAAAAGGTGAAGGTTGAGATCAAAGGAGCACAAGAATTCGGTGATTTTGAGGAGTGGTTTAACTACAGGCTCTCAAGAGCTGCACCAGAAACATGTGCCGAATTCCTTGGAAGTTTCGTAGCTGATAAAACAAATTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCTCACTCTTGCTGATTACATGAAAGATCGCAACTTCCCCTCGAACTTAGAATCCCTCATGTTTGGAAAAGTCTTGCGAGGCGAAGACTCTTCTAAGAGAAATGCCTTGATCATCAAGCAAGTAATGCGTCAGATTATTACCTCTCTTAAGAAAATTCACGACACGGGAATTGTTCACAGGGATATAAAGCCAGAGAACTTGGTGGTCACTAAGCGCGGTCGGATTAAACTCATTGATTTTGGTGCCGCAACTGACCTACGGATCGGAAAGAATTATGTTCCAGACCGTACACTACTGGATCCTGACTACTGTCCCCCGGAATTATATGTACTTCCAGAAGAAACACCAAGTCCTCCGCCAGAGCCAATTGCAGCTTTCCTTTCACCAATCTTGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCGGCTGGGGTTGTGCTTCTGCAAATGGCAATACCATCTCTGAGGTCTGCTGCTGCTTTGAGGAATTTCAATTTGGAAATCAAAAGCTGTGGATACAATTTGAAAAAATGGAGAGACTATACTCGCCTCAGGCCCGATTTTCAAATTCTGGATAGTGAATCTGGTCGAGGGTGGGACTTAGCTACAAAGCTTATATCGGAGAGAGGTTACCTAAGAAGAGGGCGGTTATCTGCTGCTGCTGCTTTAAGACACCCTTATTTTCTTCTGGGTGGTGATCAGGCAGCTGCAGTCCTCTCAAAATTAAGCTTCGACAGAAAGTGA 1533 0.4697 MASLLPPTPTVTSTIQQHCCYYNNINNLHNNQIAAICCFSPPHKKLLPITSKWKSRRGLIRCDAFFDDVATGLLELENAPYFQGLSESQRWSIVAFGGLAWIYLTARPGVLLGAIDAYLLAPLQLAFDSFSGRRNLKRTDFLVGEKLGEGSFGVVYSGVLLPKNLNDAPDQSRTRRRPRPQPPPALVVAKSQPKDKVILKKVKVEIKGAQEFGDFEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDLTLADYMKDRNFPSNLESLMFGKVLRGEDSSKRNALIIKQVMRQIITSLKKIHDTGIVHRDIKPENLVVTKRGRIKLIDFGAATDLRIGKNYVPDRTLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGVVLLQMAIPSLRSAAALRNFNLEIKSCGYNLKKWRDYTRLRPDFQILDSESGRGWDLATKLISERGYLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSFDRK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60425g00028 510 Gene3D Transferase(Phosphotransferase) domain 1 286 493 - -
Stsc60425g00028 510 SUPERFAMILY Protein kinase-like (PK-like) 138 492 IPR011009 -
Stsc60425g00028 510 Gene3D Phosphorylase Kinase; domain 1 184 258 - -
Stsc60425g00028 510 MobiDBLite consensus disorder prediction 165 187 - -
Stsc60425g00028 510 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 81 510 - -
Stsc60425g00028 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Stsc60425g00028 510 ProSiteProfiles Protein kinase domain profile. 141 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60425g00028 510 SMART serkin_6 141 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60425g00028 510 Pfam Protein kinase domain 298 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60425g00028 Stsc-Chr60425 225715 228615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60425g00028 253 417 PP2C-type Phosphatase Gene Family AT3G63340 28.283 2.14e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Stsc60425g00028 Pkinase 7.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60425g00028 - - gmx:100788727 721.85