Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60425g00005 ATGGGAAATAGGGTAGATAACAAGTACCTGCCAGTGGTGGCTATGATGGTACTACAGTGCATATATGCAGGTATTGCCCTTGGAACAAGGACTGTCTTAGTAGGAGGAATGAGTCCAAGGATCTTTGTTGTTTACCGCCAAGTTATGGCAACTCTTGTCATTCTTCCCATTGCTTATTTCTCTGGGAGGAGAAACTCTGGCTTACGGCCCTTAAGTTTTAGGAGCTTTTGGCTCATTTTCCTTGCCGCACTAATTGGGGTGACGTTGAATCAGAATCTATTGTATGAGGGTCTATATCTGGTTTCCTCTTCAATTGCAAGTGCAATGGCCAATCTTCTCCCAGCTCTCACTTTTCTAATAGCAGCTCTTCTTAGAATGGAGAGTGTGAATATTGGAAGCTGGAGAGGTATAGCCAAAATAGTGGGGACAGTAATGTGTGTAAGTGGAGCATTCGCCATGGCTTTGGTAAAGGGCTCAAAGCTACTGAATAGTGAGCAAAAGCTTCCATCATCAAATTCACTCCTCATAGGTTTAGGTGGTGGTCCTGACAACACTTGGATTCTGGGTTGTCTCCTTCTCTTTGGAAGCAGTTTGTGTTGGTCAATTTGGCTCATTTTGCAGGTTCCAGCATCTGCAAGCCACCCTAATCACTTGTCTCTATCAGCATGGATGTGTTTGATGGCAGCATTACAATCTGGAGCAGTCACACTATTCTTGGAGCCAAATCTTGCTGCTTGGAAGCTTCACTCTTTCTTTGAATTTGCTTCCACTGTATATGCTGGAGTTATGGGGTCTGCAGTGTCATTCTTTGTGCAAGCATGGTGCATCTCAAGAAGAGGTCCTCTCTTCTCTGCAATGTTCACTCCCCTGTACACTGTCATAACCACCATATTCGCAGCCATAATTCTTCACGAGAGCCTATACATCGGAAGCTTGATAGGTGCAATTGGAGTGATAATTGGCTTGTATATTGTGCTGTGGGGTAAGGCTGAAGAGGTAGCAACTGTAAATGATGTTGAGGTGGTGACAGATTCAAAAACATCCGAAGAGGAAGTGAAAATCCACATAATAAATAATAATGAATCAACTGATATTGAAGAACCCCTTCTCATCACCTCCAACTCACCTTCAGATTCTTGA 1140 0.4351 MGNRVDNKYLPVVAMMVLQCIYAGIALGTRTVLVGGMSPRIFVVYRQVMATLVILPIAYFSGRRNSGLRPLSFRSFWLIFLAALIGVTLNQNLLYEGLYLVSSSIASAMANLLPALTFLIAALLRMESVNIGSWRGIAKIVGTVMCVSGAFAMALVKGSKLLNSEQKLPSSNSLLIGLGGGPDNTWILGCLLLFGSSLCWSIWLILQVPASASHPNHLSLSAWMCLMAALQSGAVTLFLEPNLAAWKLHSFFEFASTVYAGVMGSAVSFFVQAWCISRRGPLFSAMFTPLYTVITTIFAAIILHESLYIGSLIGAIGVIIGLYIVLWGKAEEVATVNDVEVVTDSKTSEEEVKIHIINNNESTDIEEPLLITSNSPSDS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60425g00005 379 PANTHER WAT1-RELATED PROTEIN 10 340 IPR030184 GO:0016020|GO:0022857
Stsc60425g00005 379 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
Stsc60425g00005 379 Pfam EamA-like transporter family 14 147 IPR000620 GO:0016020
Stsc60425g00005 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 329 - -
Stsc60425g00005 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60425g00005 Stsc-Chr60425 49039 51833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60425g00005 7 378 Nodulin-like Gene Family AT4G30420 52.255 3.44e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60425g00005 - - adu:107473294 594.734