Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60424g00033 ATGAATGGAAGACGAGCCCATAATAAGCGCCAACGCGATGACGCCGACATCAAGCTTCGCACTGTCAAGAGGGAGCGTGTCGCCGCCGCAGAGGGCGCCGATGAGGCTGAGCCCTCGCGGGATCAAGATCCGGCTAGTCGCCGGTTGATACGCCACGAGTTTCTGAAACTCAAGACTCTCATTAGCGAGAAAAAGGAAGACTTGATGAACACCGATTCTGACAGGTTCGATTCCATCTTGAATAAGTTCAACAAGCTTCACGACCAAGTTCAGAAGCCTAGAGAGCAGGTTGCAGATGCGGAGGCGCTGCTGGAATTGACTCACAGTTTGGTGGCTTCGGTGAGGTCTATGGTGAATGGGAATGTTACCCCTGCTGAATTTGTTGGCTGTTTGATCAAGGAGTATGGCCAACCATCCACCCAAGATCCGGAGGAATACTCCATAGACTGGAAAAAACTTGGTCTTAATGTGTCCTCCATGTTTATGAAGGTTCAGGGTTGTTGCACCATGCTTGGTCCCATGGAGAAGGAGTTGAAGCAACGCAAGATCACAGCTCCGAGGGTGCGAACAAGGCTGACAACTGAAAGGGCTAGACCTCAAGAGGTTGTTCAGGCCCAAGAAAAGGAAAGAACTGATACTGACGAAAACATGAAAGTAATGTTTGACATCTTGGCAAAAACCAGACGTGTTCAACTTGAATGTCTGATTCTGAACAGAACATCTTTTGCTCAGACCGTGGAAAACTTGTTTAGCCTATCATTTTTAGTCAAAGATGGTAGGGCTCAGATCACTGTGGATGAAGACAGGAGACACTTTGTTTTGCCTAAGAATGCACCATCAGGTGATTCTTTGAGAACAAAAGAGGCATCTTTCACTCATTTCATGTTCAGACTTGATTTCCAAGATTGGAAGTTAATGAAGGATCTGGTGCCTGAGGGCAAGGAGTTAATGCCACATAGGACTCATTTTTGCACTGTTGTTGGTTCTCAACCACAGATGGGTGGTAATGGTTCCCCACCTCCTGTATCTGTCACACCAATCAGGAACTCTCAACAACAGATGGGTGGTGATGGTTCCCCACCTCCTGTATCTGCTACTCCTATCAGGAACTCTCAACCACAGATGGGTGATGGTTCCCCACCTCCTGTATCTGTAACACCCATCAGGAAACTATCTCGGAATCGAGGGCTGGTTGTGCAGAATGAAGGTGTGGTGGAAGAGTCTCCTGAATGTGATGATGAAAAATCTTCCAGAGCAGCTGCAATCAGAAGGTGTAAGCGTAAACTTCCATAG 1293 0.4749 MNGRRAHNKRQRDDADIKLRTVKRERVAAAEGADEAEPSRDQDPASRRLIRHEFLKLKTLISEKKEDLMNTDSDRFDSILNKFNKLHDQVQKPREQVADAEALLELTHSLVASVRSMVNGNVTPAEFVGCLIKEYGQPSTQDPEEYSIDWKKLGLNVSSMFMKVQGCCTMLGPMEKELKQRKITAPRVRTRLTTERARPQEVVQAQEKERTDTDENMKVMFDILAKTRRVQLECLILNRTSFAQTVENLFSLSFLVKDGRAQITVDEDRRHFVLPKNAPSGDSLRTKEASFTHFMFRLDFQDWKLMKDLVPEGKELMPHRTHFCTVVGSQPQMGGNGSPPPVSVTPIRNSQQQMGGDGSPPPVSATPIRNSQPQMGDGSPPPVSVTPIRKLSRNRGLVVQNEGVVEESPECDDEKSSRAAAIRRCKRKLP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60424g00033 430 MobiDBLite consensus disorder prediction 328 430 - -
Stsc60424g00033 430 MobiDBLite consensus disorder prediction 328 379 - -
Stsc60424g00033 430 MobiDBLite consensus disorder prediction 1 47 - -
Stsc60424g00033 430 PANTHER UNCHARACTERIZED 13 414 IPR027786 GO:0005634|GO:0006281|GO:0030915
Stsc60424g00033 430 Pfam Nse4 C-terminal 230 313 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60424g00033 Stsc-Chr60424 217479 220183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60424g00033 9 429 Non-SMC Element family AT1G51130 44.444 6.73e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60424g00033 K22825 - gmx:100792117 413.305