Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60424g00032 ATGTTGGTGTGGATGGGTTGGGCAATGATCATAGAACGCAGGCACCGGAGAGTGGAGGAGCTAGGCCAGCTTCCACCGGGACCAAGATGGTGGCCGGTGGTCGGCAACATCTTCCAACTAGGTTGGTCTTTGTCGCCACATGAGTCTTTTACAAAGCTGGCTCGAAAACACGGTCCAATCATGACCCTCTGGCTAGGCTCCATGTGCACAGTCGTGGTCTCCTCCAGCGAGGCCGCGCGTGACATGTTCAAAAACAAGGACGCCGTCCTCGCTGGCAGAAAAATCTACGAGGCCATGAAGGGTCCTCATGGCTCTGAGGGCTCGCTCATAACCTCGCAGTATGGCCCGCACTGGCGCATGCTGAGGCGACTCAGCACAACAGAATTCTTCGTGACGAGTCGCCTCGATGCCATGCGGGCCGTGCGCACAAAATGCATAAAGCGCATGGTGCACACCATAGAAGGTGCCGCCGGAGATGAATCCTCCGCCGGCGTTGAGCTAGGGAGATTCTTCTTCTTGATGGCGTTTAACCTAATTGGGAACTTGATATTCTCGAAGGATTTGTTGGAGGGTGAGATGGAGAGAGGGGCGAGATTCTATGAGCATGCGGTGAAGGTGATGGAGTATGCTGGGAAGCCGAATGTGGCGGATTTCATGGCGGTGCTGAAGTGGGTGGATCCGCAAGGCATACGGCGGAAGACTCAGTATCACGTGGAAAAAGCATTTGAGATTGCTGGATGCTTCATCAAGGAGAGGATGGAGAGTGGGTGTGGAAGGGGGATGAGTAAAGATTTCTTGGATGTGTTGTTGGAGTTTCATGGAGATGCCGCCACTGGCCCTTACACTTTCTCTCCAAGAATCATCAACGTCGTTGTCTTTGAAATGTTCACAGCAGGGACAGACACAACAACCAGCACACTGGAGTGGGCAATGGCAGAGCTTCTGCACAACCCAAGATCCCTGGAGAAGGTGCAGACGGAACTGAGGAGCAAGATAGGGCCCCACAGGGACATGGAAGAGAAGGACATTGACCATCTTCCATATCTCAAAGCAGTGATCAAAGAAACCCTGAGGCTGCACCCACCATTACCCTTCTTGGTTCCTCACATGGCCATGGACTCTTGCAACATGCAGGGCTACCACATCCCCAAGGACTCCCAAGTTCTGGTCAATGTTTGGGCCATTGGAAGGGACCCTAAGGCGTGGGACGCTCCATTGCTGTTCTGGCCAGAGAGGTTTATGGAGATGGATAGTTTGGATGTTGATTTCAAGGGTCACCACTTTGAGTTCATACCCTTTGGCTCTGGTAGAAGAATGTGCCCTGCCATGCCACTTGCCTCTAGGGTGCTCCCACTTGCTCTCGGATCATTGTTACACAAGTTTGATTGGGTTCTGCCACGTGGCATGAAACCACATGAGATGGATATGAGAGAGGGCATGGGGATTACTCTCAGAAAGGCTCTTCCTTTGAAGGCCATACCAATCCCTCACTACTAA 1497 0.5257 MLVWMGWAMIIERRHRRVEELGQLPPGPRWWPVVGNIFQLGWSLSPHESFTKLARKHGPIMTLWLGSMCTVVVSSSEAARDMFKNKDAVLAGRKIYEAMKGPHGSEGSLITSQYGPHWRMLRRLSTTEFFVTSRLDAMRAVRTKCIKRMVHTIEGAAGDESSAGVELGRFFFLMAFNLIGNLIFSKDLLEGEMERGARFYEHAVKVMEYAGKPNVADFMAVLKWVDPQGIRRKTQYHVEKAFEIAGCFIKERMESGCGRGMSKDFLDVLLEFHGDAATGPYTFSPRIINVVVFEMFTAGTDTTTSTLEWAMAELLHNPRSLEKVQTELRSKIGPHRDMEEKDIDHLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYHIPKDSQVLVNVWAIGRDPKAWDAPLLFWPERFMEMDSLDVDFKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHKFDWVLPRGMKPHEMDMREGMGITLRKALPLKAIPIPHY 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60424g00032 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Stsc60424g00032 498 FunFam Cytochrome P450 76C4 16 493 - -
Stsc60424g00032 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 496 - -
Stsc60424g00032 498 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 Pfam Cytochrome P450 25 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 SUPERFAMILY Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60424g00032 498 CDD CYP76-like 54 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60424g00032 Stsc-Chr60424 213993 216908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60424g00032 23 497 Cytochrome P450 AT3G52970 62.020 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60424g00032 - - gmx:100778988 768.074