Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60424g00006 ATGCCGAAAATTCATCAAGCTGAACATGCGTTTTCAATGAAGGATCGCATGGGTAATAATCATCGATCTACACAACCAGATCATCGTAACTTCAAGCTTGATAACAATTTGATGTATAAAATCATGAAGAACGATCCTTCCGTTATGAAAAAATTCTTTGAGAAAGTAGTGTTGCGGCCACCAGGAGGAATAGGAATAGGAATAAGGATAGTTCGTAGTTGTGACACCAACAACAACACCGAACCAATCAGAAACCACGTTGAGGATCAGATCCATCACCATGATGATCCAAATAATGATTCTGTGAATGTTGTTGTTGCTGCTGATGCTGATGCTGCTGATGATGGTGTAAAAGTTGTTGTTGCTGCTGATGCTGCTGAGGGTGGAAAAGTTGCTGAGGATGATGAAGCGAGAATCAGGAGCCTTCCGTACAAGAAACATGGACCGTACACGTGTCCAAAGTGTAACGTGGTGTTCTTAACATCACAAAAATTTGCGGCTCACACAAGTTCTCACTACAAGCATGAGACTAAGGATGAGAAAAAGAAGAGAAGAATGCTGAAAAAGATGTGTAGAAACAAGAAAAGAGCCCACGAAATTCAACAACAGTTCATGGATGATTTAGCGGGAGCAGAAGGATCCAACACTTTGCACGAGGTGAAAGTGGAATATGAACCCTGTTATCATAATGATAAAGTTGATGCTCCTCCTGGTTTTCCTGTCCCTTTGGGCCCTGCAAAGATCAAGGTGGAGCCTTTTCCATAG 765 0.4183 MPKIHQAEHAFSMKDRMGNNHRSTQPDHRNFKLDNNLMYKIMKNDPSVMKKFFEKVVLRPPGGIGIGIRIVRSCDTNNNTEPIRNHVEDQIHHHDDPNNDSVNVVVAADADAADDGVKVVVAADAAEGGKVAEDDEARIRSLPYKKHGPYTCPKCNVVFLTSQKFAAHTSSHYKHETKDEKKKRRMLKKMCRNKKRAHEIQQQFMDDLAGAEGSNTLHEVKVEYEPCYHNDKVDAPPGFPVPLGPAKIKVEPFP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60424g00006 254 ProSitePatterns Zinc finger C2H2 type domain signature. 152 172 IPR013087 -
Stsc60424g00006 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 177 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60424g00006 Stsc-Chr60424 73982 74746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60424g00006 124 210 C2H2 Transcription Factor Family AT2G15740 47.826 1.26e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60424g00006 - - ahf:112709584 167.548