Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60423g00038 ATGGAACGAACCAATCCGTACAAGAACACTCCTACTTGGGTGCTTCCTCCCAACCACCGCCCTTATCCTCCCCTTCCCTCACTCACTCCCTTCCTCCCTCCAAAAACCTTACCCGCTAAGAAATTCAATTCAATTACAAAACAACAACAGTTTCACGCCTTCTACGAAGAATGGCTCCAACGCCAACAAACTCTCCTCAACGACCTTCTCACACTCTCCAACGCTCCCCTCTCTCAACACAAACACACACACACCACTCTAATCGAAACCGTTCTCTCCCACTACCAACAATACTTCGACCACAAAAAACGCCTCCAAAACGACGACGTTTTGCTCCTCTTCTCTCCCACCTGGCTCTCCACCTACGAGCGAGCACTTCTCTGGATCGGAGACTACAAGCCTTCGCTAATCCTCCGCATCGCCGACGCCTCTCTCCACGATCTCACGCCGGACCAGATCCATGCCATTCAGAGGATCAGGGCGGATACAAGGAGAGGGGAGAGGGAGCTTTCTGGTGCAATGGCGGGGGTTCAGGAGGCTGTGGCTAGTCCGCGCGTATTGCAACGCGCTAGAAGAGTCGGTAGGTTGTTGGATGGAGAGATTGATGAGCTCGATGAGGCTATGGCGGCGTTAAGGAATGCCGTTGAAGAGGTTTTTCAGAGAGGGGATGAACTCAGGGTGGCTACGGTTAGGAACGTGGTGGCGATTCTCTCGCCACCGCAGACGGTTAGCTTTCTTGCGGCGGCCTTGGGGTTTCAGTTACGTGTCAGGCAGTGGGGGTTGGAAAGGGATCAATCCCGATAA 804 0.5348 MERTNPYKNTPTWVLPPNHRPYPPLPSLTPFLPPKTLPAKKFNSITKQQQFHAFYEEWLQRQQTLLNDLLTLSNAPLSQHKHTHTTLIETVLSHYQQYFDHKKRLQNDDVLLLFSPTWLSTYERALLWIGDYKPSLILRIADASLHDLTPDQIHAIQRIRADTRRGERELSGAMAGVQEAVASPRVLQRARRVGRLLDGEIDELDEAMAALRNAVEEVFQRGDELRVATVRNVVAILSPPQTVSFLAAALGFQLRVRQWGLERDQSR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60423g00038 267 Coils Coil 197 221 - -
Stsc60423g00038 267 ProSiteProfiles DOG1 domain profile. 48 266 IPR025422 GO:0006351|GO:0043565
Stsc60423g00038 267 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 50 266 - -
Stsc60423g00038 267 Pfam Seed dormancy control 72 140 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60423g00038 Stsc-Chr60423 297429 298338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60423g00038 37 248 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 26.047 3.04e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60423g00038 - - aprc:113865861 235.728