Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60423g00011 ATGTCTACCCAAGGAGTGCGGTTGCACATCGAAGATCGCTATGTGGTGATGGATAATGGTATAGTTCAAGTGACGTTATCAAATCCAGGGGGAATTGTTACTGGTGTAGCTTATAATGGGGTTGATAATTTGCTTGAAGTTCTCAACAAAGAGAATAACAGAGGGTACTGGGATCTTGTTTGGGGTGCACCAGGAATCAAAGGAACCTTTGATGTGTATGGCAACAGTACCTTCTTTGTAACTGCACGGCCTCCATGTCAATTCTCAATAAAGCTATATTCAAATGCAACCACTTATTAG 300 0.4167 MSTQGVRLHIEDRYVVMDNGIVQVTLSNPGGIVTGVAYNGVDNLLEVLNKENNRGYWDLVWGAPGIKGTFDVYGNSTFFVTARPPCQFSIKLYSNATTY 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60423g00011 99 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 84 - -
Stsc60423g00011 99 Pfam Rhamnogalacturonate lyase family 9 80 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60423g00011 Stsc-Chr60423 74854 75729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60423g00011 1 92 Polysaccharide Lyase AT1G09910 63.043 2.87e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60423g00011 K18195 - jre:109004812 135.191