Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60422g00041 ATGAGTACCAATGCAAGGAACATGATGAGATGGAATAGAATGGACCAATGGCTTCTATTTTCTGCTATTCTTTTACTGCATAACTTTCTGTTCCTCTCTCAGACACTTGCTGAGACAACAACCTCTGTTCATCACAAAATATTATCTTCACTTCTAGGAAGCAAAGAAGCTGCAAAGAATTCAATTCTTTACAGCTATAGGCATGGATTTTCAGGGTTTGCTGCAAGGTTAACAAAATCTCAAGCAGAAGAAGTAGCAAAATTTCCAGGGGTAGTGTCTGTCTTTCCGAATCGAATACACAAGCTTCACACAACTAGAAGTTGGGACTTCATTGGTATGCATCATTCATCTTCAAACACTGCTTCCAATGAAAGCAACTTGGGTGAAGGAACCATAATAGGTGTCATTGACACAGGAATCTGGCCGGAGTCTGCGAGTTTCAACGACGAAGCAATGGGACAAATCCCATCAAGGTGGAAAGGAGTTTGTGAAGAGGGAGAGCAATTCAGTTCCAAAAACTGCAACAAGAAGATAATAGGAGCTAGATGGTTCTTGAAAGGAGTATCTCATGATGCTAAGAAGCTGATCCATGGAAACGAAAGCATCGAATATCTCTCAGCTCGAGACGCTATAGGCCACGGCACTCACACAGCTTCCACAGCAGCAGGGTACTTTGTAGGAAATGCAGATTACAAAGGACTTGCTTCTGGCATAGCAAGAGGAGGAGCTCCACTTGCACACTTAGCTATATACAAGGCATGCTGGGACATTTCTGTTGGAGGTTGTTCTGGTGCAGATATCCTTAAGGCTTTTGACAAGGCAATCCATGATGGAGTAGACATCTTAACAGTTTCTCTTGGCCTTAACATTCCTTTGTTTTCATATGTTGATCAAAGAGACACCATAGCAATTGGTTCCTTTCATGCTACTGCTAAGGGAATTACAGTTATATGTTCAGCTGGGAATTCTGGTCCCAGCTCTCTAACTGTTTCAAATACTGCTCCATGGATCATCACAGTTGCAGCCACCACAATAGATAGGGCCTTTCCTACTGCCATTGTTCTTGGAAATAATCTCACTCTCTGGGGGGAGTCCTTAGATGTTGGAAAGCATCACAGCATTGGATTTGTTGAACTAACATACTCCGAACGCGTCGCTTTAGACCCTGAAGATGATTCAGCTAAGGATTGTCAGTCTGGAAGTCTGAATGCTACAATGGCAGCAGGGAAAATCGTGCTATGCTTTTCGCTATCCGAGGAACAGGATATTGTCTCTGCATCCCTTGCTGTAAGGGAAGCTGGAGGAGTTGGACTAATATTTGCACAATCTCATGAAGATGGACTCAATCAATGTGAATCTTTTCCATGTGTTAAGGTAGATTATGAAGTAGGGACACAGATAGTATCCTATATTAGAAGAGCAAGGTTTCCAACTGCAAGCCTTAGAGCTCCAAAGACTGTTATTGGAAAATTGACTTCTCCAAGGGTTGCAACATTCTCATCTAGAGGACCTAGCACCATGTCTCCTTCTGTGTTAAAGCCAGACATAGCAGCACCAGGTGTGGACATTTTGGCTGCATTTACACCAAAAGGCACCACAAAGAATAGTGGATTTCAATTCTTATCTGGAACATCAATGTCATGTCCTCATGTGGCTGGAATAGCATCTCTCATCAAATCCAAACACCCAACATGGTCACCTGCAGCCATAAGATCAGCTATGGTTACAACAGCATCTCAAAATGGAAATGATGGAAGCTTTATATCTGAAGAGGGTTCCACACTTAAGGAAGCTGATCCATTCGACATTGGTGGCGGCCATGTGAACCCCATCAAAGCAATGGATCCTGGGCTCATATATGATATCACCAATAAGGATTATATCCAGTTCCTGTGTTCCATGGGATATAGTAGTTCATCAATTAGAAAATTGTCCAAGACCACAAGAAGTTGTGAAAAAGAAAAATACCAAGGACTGAACCTCAACCTTCCTTCCATATCAGTTCCAAACTTGAAGAAGGCTGCAAAAGTAATAAGAACAGTGACAAATGTAGGAAACATAACTGCAGTCTATAAAGCTCTAGTTAGGGCACCATATGGCATAGAAGTGAGAGTTGAACCTCAAATTCTTAGTTTCAACTCAGACACCACAGTAATTTCCTTTAGTGTCAGGTTTCATTCAACTCAAAAGGTGCATCATGGTGATTACAGATTTGGGAGCCTCACTTGGACAGATGGGAATCATTCTGTGAGGACCCCAATAGTTGTAAGAACCATAAAATTTGAATCATAA 2292 0.4193 MSTNARNMMRWNRMDQWLLFSAILLLHNFLFLSQTLAETTTSVHHKILSSLLGSKEAAKNSILYSYRHGFSGFAARLTKSQAEEVAKFPGVVSVFPNRIHKLHTTRSWDFIGMHHSSSNTASNESNLGEGTIIGVIDTGIWPESASFNDEAMGQIPSRWKGVCEEGEQFSSKNCNKKIIGARWFLKGVSHDAKKLIHGNESIEYLSARDAIGHGTHTASTAAGYFVGNADYKGLASGIARGGAPLAHLAIYKACWDISVGGCSGADILKAFDKAIHDGVDILTVSLGLNIPLFSYVDQRDTIAIGSFHATAKGITVICSAGNSGPSSLTVSNTAPWIITVAATTIDRAFPTAIVLGNNLTLWGESLDVGKHHSIGFVELTYSERVALDPEDDSAKDCQSGSLNATMAAGKIVLCFSLSEEQDIVSASLAVREAGGVGLIFAQSHEDGLNQCESFPCVKVDYEVGTQIVSYIRRARFPTASLRAPKTVIGKLTSPRVATFSSRGPSTMSPSVLKPDIAAPGVDILAAFTPKGTTKNSGFQFLSGTSMSCPHVAGIASLIKSKHPTWSPAAIRSAMVTTASQNGNDGSFISEEGSTLKEADPFDIGGGHVNPIKAMDPGLIYDITNKDYIQFLCSMGYSSSSIRKLSKTTRSCEKEKYQGLNLNLPSISVPNLKKAAKVIRTVTNVGNITAVYKALVRAPYGIEVRVEPQILSFNSDTTVISFSVRFHSTQKVHHGDYRFGSLTWTDGNHSVRTPIVVRTIKFES 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60422g00041 763 Gene3D Peptidase S8/S53 domain 130 627 IPR036852 GO:0004252|GO:0006508
Stsc60422g00041 763 CDD PA_subtilisin_like 353 481 - -
Stsc60422g00041 763 Pfam Peptidase inhibitor I9 38 103 IPR010259 -
Stsc60422g00041 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 103 IPR037045 -
Stsc60422g00041 763 Gene3D - 346 488 - -
Stsc60422g00041 763 CDD Peptidases_S8_3 100 579 IPR034197 -
Stsc60422g00041 763 FunFam Subtilisin-like protease SBT5.3 30 103 - -
Stsc60422g00041 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 756 IPR045051 -
Stsc60422g00041 763 Gene3D - 631 759 - -
Stsc60422g00041 763 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Stsc60422g00041 763 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Stsc60422g00041 763 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Stsc60422g00041 763 FunFam Subtilisin-like protease SBT1.5 631 759 - -
Stsc60422g00041 763 FunFam subtilisin-like protease SBT1.5 346 488 - -
Stsc60422g00041 763 FunFam Subtilisin-like protease SBT1.5 130 355 - -
Stsc60422g00041 763 Pfam Fibronectin type-III domain 660 756 IPR041469 -
Stsc60422g00041 763 SUPERFAMILY Subtilisin-like 102 618 IPR036852 GO:0004252|GO:0006508
Stsc60422g00041 763 ProSiteProfiles Serine proteases, subtilase domain profile. 107 614 - -
Stsc60422g00041 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Stsc60422g00041 763 Pfam Subtilase family 128 583 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60422g00041 Stsc-Chr60422 271590 275654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60422g00041 38 758 Subtilisin-like Serine Gene Family AT1G32960 51.786 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60422g00041 - - gmx:100792709 1205.28