Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60421g00054 ATGATATTGAACAAATTTTTCTTGAGATTGTACATTTGTACATCCATATATGTTCATTATTACAAAGCATATAATAAAATCATTGAGGCTTTGTCTCTTTCTTTTACCTTCCTTAAGGGTTATGGAAGGGAGGATACAGCATTTTGTGGCGTTTTTGATGGACATGGAAGGAATGGTCGCATAGTGAGCCAAATAGTAAACAAGCGTTTGTCTTCACTCATTCTGAACCAAAAGAATATGATAGCTAATGACAAGATTGATAACAACATCATATTGGAAGATGACGACTCGTGTACAAACAAGAATTTTCAAGAATGGAAAGAAGCTATTCTTTGTGCTTTCAGGGTGATGGACAAGGAGGTGAATCAACTAGAGAATCTAGATTTCTCTTGCAGTGGAACTACAGCTATAGTTGCTATAAGACAGAATGAAGATCTTATCATGGCTAACCTTGGTGACTCAAGAGCTGTGTTGGGGACAACATGTGACGGTGAAATCATTCCCATTCAACTGACCACGGATATGAAGCCTGGATTACCTGATGAAGCAGATAGAATAAGAAGTTGTAATGGTCGTGTATTTGCTCTACATGAGGAACCACACATCCAAAGAGTGTGGTTACCAGATGAGAATGCCCCAGGGCTAGCTATGTCTCGTGCTTTTGGAGATTTCATTCTTAAGGACCATGGCATTATTGCTATTCCGGAGATTTCGTATCGCCCTCTAACATTAAGTGACCAATTTCTTGTGCTTGCAAGTGATGGGGTATGTGCATTGTGA 780 0.391 MILNKFFLRLYICTSIYVHYYKAYNKIIEALSLSFTFLKGYGREDTAFCGVFDGHGRNGRIVSQIVNKRLSSLILNQKNMIANDKIDNNIILEDDDSCTNKNFQEWKEAILCAFRVMDKEVNQLENLDFSCSGTTAIVAIRQNEDLIMANLGDSRAVLGTTCDGEIIPIQLTTDMKPGLPDEADRIRSCNGRVFALHEEPHIQRVWLPDENAPGLAMSRAFGDFILKDHGIIAIPEISYRPLTLSDQFLVLASDGVCAL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60421g00054 259 CDD PP2Cc 34 256 IPR001932 -
Stsc60421g00054 259 SUPERFAMILY PP2C-like 41 257 IPR036457 -
Stsc60421g00054 259 PANTHER PROTEIN PHOSPHATASE 36 257 IPR015655 GO:0004722|GO:0006470
Stsc60421g00054 259 Pfam Protein phosphatase 2C 34 256 IPR001932 -
Stsc60421g00054 259 ProSiteProfiles PPM-type phosphatase domain profile. 32 259 IPR001932 -
Stsc60421g00054 259 SMART PP2C_4 9 259 IPR001932 -
Stsc60421g00054 259 Gene3D - 29 259 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60421g00054 Stsc-Chr60421 301062 302627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60421g00054 39 256 PP2C-type Phosphatase Gene Family AT5G26010 55.251 4.41e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60421g00054 - - gmx:100795893 326.25