Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60421g00053 ATGGGTATCTGCATATCCACCGAATATTCAGAGATTCATCATGAATCATCTAAATTAGCTACTGATGAGAATGTAACAGTATTTGAGTCTGGCAAGAATAGTAAATTAAGCAAGATTCACAGACTTTCTTCTATATACTCTAAAAAGGGTAGCAAAGGACTCAACCAAGATGCTGCCACTCTTTACCAGGGTTATGGAAGGGAGGATACAGCATTTTGTGGCGTTTTTGATGGACATGGAAGGAATGGTCGCATAGTGAGCCAAATAGTAAACAAGCGTTTGTCTTCACTCATTCTGAACCAAAAGAATATGATAGCTAATGACAAGATTGATAACAACATCATATTGGAAGATGACGACTCGTGTACAAACAAGAATTTTCAAGAATGGAAAGAAGCTATTCTTTGTGCTTTCAGGGTGATGGACAAGGAGGTGAATCAACTAGAGAATCTAGATTTCTCTTGCAGTGGAACTACAGCTATAGTTGCTATAAGACAGAATGAAGATCTTATCATGGCTAACCTTGGTGACTCAAGAGCTGTGTTGGGGACAACATGTGACGGTGAAATCATTCCCATTCAACTGACCACGGATATGAAGCCTGGATTACCTGATGAAGCAGATAGAATAAGAAGTTGTAATGGTCGTGTATTTGCTCTACATGAGGAACCACACATCCAAAGAGTGTGGTTACCAGATGAGAATGCCCCAGGGCTAGCTATGTCTCGTGCTTTTGGAGATTTCATTCTTAAGGACCATGGCATTATTGCTATTCCGGAGATTTCGTATCGCCCTCTAACATTAAGTGACCAATTTCTTGTGCTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACAATGAGGTTTGCTCAATTGTGTGGACGACAAAGAATGAAGCAGCGGCAGCAAAGGCAGTGGTGGAAGCAGCTACGGCAGCATGGAAAAGCAAATATCCTTCCTCCAGGGTAGACGACTGCACCGTGGTTTGCCTCTTCCTGCAGAAGAAACAAAGGAGCCTAGTGCATGTAAAAACTGGAAATAATGTTAATCCCTGTGATAGCTTGCATAAGAAGGCCTTGCTATAA 1086 0.4171 MGICISTEYSEIHHESSKLATDENVTVFESGKNSKLSKIHRLSSIYSKKGSKGLNQDAATLYQGYGREDTAFCGVFDGHGRNGRIVSQIVNKRLSSLILNQKNMIANDKIDNNIILEDDDSCTNKNFQEWKEAILCAFRVMDKEVNQLENLDFSCSGTTAIVAIRQNEDLIMANLGDSRAVLGTTCDGEIIPIQLTTDMKPGLPDEADRIRSCNGRVFALHEEPHIQRVWLPDENAPGLAMSRAFGDFILKDHGIIAIPEISYRPLTLSDQFLVLASDGVWDVLSNNEVCSIVWTTKNEAAAAKAVVEAATAAWKSKYPSSRVDDCTVVCLFLQKKQRSLVHVKTGNNVNPCDSLHKKALL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60421g00053 361 Gene3D - 25 337 IPR036457 -
Stsc60421g00053 361 SUPERFAMILY PP2C-like 40 334 IPR036457 -
Stsc60421g00053 361 SMART PP2C_4 29 331 IPR001932 -
Stsc60421g00053 361 PANTHER PROTEIN PHOSPHATASE 40 331 IPR015655 GO:0004722|GO:0006470
Stsc60421g00053 361 ProSiteProfiles PPM-type phosphatase domain profile. 42 333 IPR001932 -
Stsc60421g00053 361 CDD PP2Cc 41 295 IPR001932 -
Stsc60421g00053 361 Pfam Protein phosphatase 2C 64 311 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60421g00053 Stsc-Chr60421 301057 302627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60421g00053 1 338 PP2C-type Phosphatase Gene Family AT5G26010 52.907 1.15e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60421g00053 - - gmx:100795893 462.611