Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60421g00018 ATGACTTTCCAAGACCACGAACTGCTTCACTTCATGCTCACCCAAACCGAAATAGACGACCTCTTTTCCCTCATTAACCACCTTCCGGCCAGCCCTAGCTCCGGCTCGCAGGGGTCCAACCGGGCGGTTTACTCCACCGAGGAGAGAAAGCTGAGGCGCATGCAGTCAAACCGGGAATCGGCCCGAAGATCCCGCGGCAGAAAGAAGAAGCACTTGGAGAATCTGACGGTCCAATTGAACCGGTTGAGACTCGAAAACCGAGAACTCAAGAACCGGCTAGTGGCGACCATGCACCAGCATCTTCTAGTCTCCCTGGAGAATGAACAGCTACGTTCCGAATCCATTGCACTTGGTTCCACACTTTCCGATCTTTGTGAGATTTTGCGAACCATGCCTCTACAATAA 405 0.5259 MTFQDHELLHFMLTQTEIDDLFSLINHLPASPSSGSQGSNRAVYSTEERKLRRMQSNRESARRSRGRKKKHLENLTVQLNRLRLENRELKNRLVATMHQHLLVSLENEQLRSESIALGSTLSDLCEILRTMPLQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60421g00018 134 Pfam bZIP transcription factor 48 93 IPR004827 GO:0003700|GO:0006355
Stsc60421g00018 134 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 52 67 IPR004827 GO:0003700|GO:0006355
Stsc60421g00018 134 PANTHER BZIP TRANSCRIPTION FACTOR 44 32 131 - -
Stsc60421g00018 134 MobiDBLite consensus disorder prediction 45 61 - -
Stsc60421g00018 134 Coils Coil 72 99 - -
Stsc60421g00018 134 Gene3D - 47 101 - -
Stsc60421g00018 134 MobiDBLite consensus disorder prediction 30 44 - -
Stsc60421g00018 134 Coils Coil 44 64 - -
Stsc60421g00018 134 CDD bZIP_plant_GBF1 50 100 IPR045314 GO:0003700|GO:0006355
Stsc60421g00018 134 MobiDBLite consensus disorder prediction 30 70 - -
Stsc60421g00018 134 FunFam BZIP transcription factor 47 99 - -
Stsc60421g00018 134 SUPERFAMILY Leucine zipper domain 49 99 IPR046347 GO:0003700|GO:0006355
Stsc60421g00018 134 SMART brlzneu 45 109 IPR004827 GO:0003700|GO:0006355
Stsc60421g00018 134 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 47 93 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60421g00018 Stsc-Chr60421 79554 80554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60421g00018 13 128 bZIP Transcription Factor Family AT3G49760 37.600 8.22e-18 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc60421g00018 bZIP_1 3.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60421g00018 - - gmx:102661984 166.007