Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60420g00038 ATGGGTGAAAATCACTATTCTTGGTTAAGGAGGACAAAATTCTCTCACACTGTGTGCCACCGCTTGAATCCTTCTACACTAGGTTTTATTCCTCTCAGCATTGAGACAGAGCACAATTCAGGTCTGAAATCAAGGCCTTCTTACATGCAGAGATCTTCTTCACCCTTGCCCGAAATTTTGCTTTCTGATACCTTTAGGGAAGCGCGGCATGATCAAAAGAGGTTTTCAACACCAGGTCCTAGGAGGAATTACAGCAATAAGGGAAACATAGGCAAGTTGCAAAGCAATGAGGTTGGGGAGAGTAATATTTTGAGGTCGAAATTGCATTCTAATAGTCAGAATAGCCAAGTGAAACCAGACAATAACTCAAACCACCAAAAAGATTTAGCCTGGACCAAGTGTTTAGACAGCAAAGGAGGTGGAAGCAGAGGAGGTGGAAGTGTTACCCCTAAAGAAATCCATGAACAATGGAATGCTGACCTCTCTCAATTGTTTCTTGGCCTTAAGTTTGCTCATGGTGCTCATAGTCGGCTTTATCATGGTGTATATAAGGAAGAGTGTGTTGCAGTTAAAATGATTAGAGTACCTGAAGATGATGAAGATGGAACCTTGGCTTCTAAATTAGAGAATCAGTTCACTAGAGAAGTTACCCTTTTATCTCACCTTCACCATCCAAATGTTATAAAGTTAGTAGCAGCATGCAGAAAGCCACCAGTTTATTGTATCATCACAGAGTATCTATCAGAAGGTTCTTTGAGGTCATACTTGCATAAGTTGGAGCGCAAACCTATGTCTCTACAAAAGCTAATTGCTTTTGCTCTAGATATTGCTCGCGGAATGGAGTATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAACCAGAGAATGTCCTCATTAACGAAGACTCTCACCTTAAAATTGCAGATTTTGGAATTGCGTGTGAGGAGGTAGTTTGTGATTTATTGGCTGATGACCCGGGAACCTACCGGTGGATGGCGCCTGAGATGATCAAACGTAAATCCTATGGAAAAAAAGTTGATGTCTACAGTTTCGGGCTTATGTTATGGGAAATGTTGACTGGAATAATACCATATGAGGAAATGACTCCAATACAGGCTGCTTTTGCTGTAGTAAATAAGAATTCAAGGCCAGTTGTTCCTTCAGACTGCCAACCTGCTATGCGAGCCTTGATTGAGCAATGTTGGTCTTCCCAACCTGATAAGAGGCCGGATTTCTGGCAGATTGTTAAGGTATTAGAGCAATTTGAATCCTCCCTTGCGGAAGACGGGACCCTGACTCTGGTAGAAAACCCTCTTCCCCATGATCATAAGAAAGGTCTTCGGCATTGGATTCAAAAGCTTAGTCCAGCCTATCCTGCGCATCCAAACGGTAGCCCTGTCCCTAAACCCAAATTCACATGA 1425 0.4232 MGENHYSWLRRTKFSHTVCHRLNPSTLGFIPLSIETEHNSGLKSRPSYMQRSSSPLPEILLSDTFREARHDQKRFSTPGPRRNYSNKGNIGKLQSNEVGESNILRSKLHSNSQNSQVKPDNNSNHQKDLAWTKCLDSKGGGSRGGGSVTPKEIHEQWNADLSQLFLGLKFAHGAHSRLYHGVYKEECVAVKMIRVPEDDEDGTLASKLENQFTREVTLLSHLHHPNVIKLVAACRKPPVYCIITEYLSEGSLRSYLHKLERKPMSLQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDSHLKIADFGIACEEVVCDLLADDPGTYRWMAPEMIKRKSYGKKVDVYSFGLMLWEMLTGIIPYEEMTPIQAAFAVVNKNSRPVVPSDCQPAMRALIEQCWSSQPDKRPDFWQIVKVLEQFESSLAEDGTLTLVENPLPHDHKKGLRHWIQKLSPAYPAHPNGSPVPKPKFT 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60420g00038 474 MobiDBLite consensus disorder prediction 78 97 - -
Stsc60420g00038 474 FunFam Kinase suppressor of Ras 1 153 247 - -
Stsc60420g00038 474 ProSiteProfiles Protein kinase domain profile. 164 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60420g00038 474 Pfam Protein tyrosine and serine/threonine kinase 169 420 IPR001245 GO:0004672|GO:0006468
Stsc60420g00038 474 CDD STKc_MAP3K-like 171 420 - -
Stsc60420g00038 474 SUPERFAMILY Protein kinase-like (PK-like) 153 420 IPR011009 -
Stsc60420g00038 474 Gene3D Phosphorylase Kinase; domain 1 152 248 - -
Stsc60420g00038 474 PRINTS Tyrosine kinase catalytic domain signature 391 413 IPR001245 GO:0004672|GO:0006468
Stsc60420g00038 474 PRINTS Tyrosine kinase catalytic domain signature 328 338 IPR001245 GO:0004672|GO:0006468
Stsc60420g00038 474 PRINTS Tyrosine kinase catalytic domain signature 347 369 IPR001245 GO:0004672|GO:0006468
Stsc60420g00038 474 PRINTS Tyrosine kinase catalytic domain signature 282 300 IPR001245 GO:0004672|GO:0006468
Stsc60420g00038 474 PRINTS Tyrosine kinase catalytic domain signature 244 257 IPR001245 GO:0004672|GO:0006468
Stsc60420g00038 474 Gene3D Transferase(Phosphotransferase) domain 1 249 446 - -
Stsc60420g00038 474 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 426 - -
Stsc60420g00038 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Stsc60420g00038 474 MobiDBLite consensus disorder prediction 69 97 - -
Stsc60420g00038 474 SMART serkin_6 164 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60420g00038 474 FunFam serine/threonine-protein kinase HT1 249 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60420g00038 Stsc-Chr60420 161970 165126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60420g00038 1 474 MAP Kinase Kinase Kinase AT5G58950 51.977 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc60420g00038 PK_Tyr_Ser-Thr 4.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60420g00038 - - gmx:100500590 690.649