Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60419g00054 ATGATGATGGAAACAAAGCAAGAAGGCATAACAGAAGAGAAGAACAGTAATAACAATGAGAAAGACAAGTTTACCCTCAAAGGAGGAGCATCATCTTCAACATCAACAAGGCAATGGTCAGCATTCCGTAACCCAAGAATCGTGAGGGTATCAAGGTCATTTGGCGGTAAAGACAGACACAGCAAGGTTTGCACGATAAGAGGCCTTCGTGACCGTCGGATCAGGCTCTCCGTTCCCACCGCCATTCAATTGTACGATCTCCAAGACAAGCTCGGACTCTCTCAACCAAGCAAAGTCATCGATTGGCTTCTAGAAGCTACCAAGCTTGACATTGACAAGCTTCCCCCTCTTCATTTCCCTCTCCACCCCCAATTCCAAACCCTATTCCCTCACCACCTCCTCCACGACCCTTCGATTTCTCCCTTCGCCGCCGCTGCTGCCGCTGCCGCTGTCGATTCTCCCGCCTCTTCGAGGTTCCTTAAAGGCAAAGACTTGGTGATTTCTTCAAATTCCGATAATAACAAGGGGAAGTGGATGTTCAAGAGTAGTAACAACAACAATCAATTTGGAATTGGCAATGGTTATGGTTACGGTTACGGTTATAACGGCTTGTCTTCTGGGACAACCACTCAGAGGCTTTTCCCCATGGGGAATGCAACAACTAATAACAACCCTTTGCAGAGTTTGTTAAACTATAACAACTCCTCCTCTTTCTCCGATGGATCTTCTTCGTTGTCTACTTCAGCTTCTTATTATCATGGGGGAGATTATTACGGTGGTGGTGGTTGTTATCCAATGATAAATAATAATAATAGTGGGGGCTTGATGCAATTTAACCATTTGTCTTCTTTGCAAGTAGGCCCATCTGGTTCTTCCTCACAGTTATTGTTTGGTCCATTATCTTCTGCTGGTGCTGCTACACAGCAGATTTTCACACCTTATGCACCACCATTTGTAACAACCCCAGCATCTGTCGTGGAAAGTAATAATAATAATGGTGGTGGTGGTGATCAAATAAGACATCAATTCAATAGCCAAATTCATCAGTTCTTGAACTCATCGTCGTCGTCGTCGTCAAGCCTTTTCTATCATCATCATCATTCGTTGTTTAACTCATCACCTGTCAGACCCTTCCCTACACTACCCTTCAGCTCCAAGCTTCTAGATTCTTCTTCGGATCGCAATGGAGGCCACCAACCGGATCATAGTAACAATAAGGGTACTACTACTACTTCAGCTCGTTCTTGA 1248 0.4471 MMMETKQEGITEEKNSNNNEKDKFTLKGGASSSTSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKLDIDKLPPLHFPLHPQFQTLFPHHLLHDPSISPFAAAAAAAAVDSPASSRFLKGKDLVISSNSDNNKGKWMFKSSNNNNQFGIGNGYGYGYGYNGLSSGTTTQRLFPMGNATTNNNPLQSLLNYNNSSSFSDGSSSLSTSASYYHGGDYYGGGGCYPMINNNNSGGLMQFNHLSSLQVGPSGSSSQLLFGPLSSAGAATQQIFTPYAPPFVTTPASVVESNNNNGGGGDQIRHQFNSQIHQFLNSSSSSSSSLFYHHHHSLFNSSPVRPFPTLPFSSKLLDSSSDRNGGHQPDHSNNKGTTTTSARS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60419g00054 415 MobiDBLite consensus disorder prediction 1 21 - -
Stsc60419g00054 415 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 369 IPR005333 GO:0003700
Stsc60419g00054 415 MobiDBLite consensus disorder prediction 1 38 - -
Stsc60419g00054 415 MobiDBLite consensus disorder prediction 401 415 - -
Stsc60419g00054 415 MobiDBLite consensus disorder prediction 386 415 - -
Stsc60419g00054 415 Pfam TCP family transcription factor 56 117 IPR017887 -
Stsc60419g00054 415 MobiDBLite consensus disorder prediction 22 38 - -
Stsc60419g00054 415 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60419g00054 Stsc-Chr60419 336531 337778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60419g00054 4 221 TCP Transcription Factor Family AT5G60970 45.020 2.28e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc60419g00054 TCP 3.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60419g00054 - - ahf:112786937 417.927