Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60419g00042 ATGTTCAGAAAGGAGTCAAAGTTACTACAAGAACAAGAAGATGAGAGAATAAAGACTAAGAGGAGTGACATGACACCAAAGCCATTGTTACAATGCACACACCACCTTTGTCATGTGAGGGTTCATTGGCACATCAAAGACAACTACCAAGATTATTGGAGGGTCAAGATTGCCATCATCAACTTCGATTTTCGACTCAATTACACCTTGTGGAACCTTGTTATCCAACACCCCAATCTCAACAATGTCACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATGAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAGTATTACAATGATCTATTGATGGAAAATGGGCCTAAAGGGAATGTGCAATCTGAGATTCTTATGAAGAAGGACAAGAACACATTCACACTCAAGAATGGATGGGCTTTTCCAAGGAGAGTCTACTTCAATGGTGAAGAATGCATGCTTCCACCTCCTGATTCATACCCTTTCTTGCCTAACTCCGCTCCTAGGCTACCAATTCGCGCTTCGTCGGTAGCAGCCGGCTCCATTTTCGCCTCGTTTTTTCATTTGGTTTTGATACTTTTGTGA 600 0.415 MFRKESKLLQEQEDERIKTKRSDMTPKPLLQCTHHLCHVRVHWHIKDNYQDYWRVKIAIINFDFRLNYTLWNLVIQHPNLNNVTQVYSFEYMPLLPYEAINDTGMFYGLKYYNDLLMENGPKGNVQSEILMKKDKNTFTLKNGWAFPRRVYFNGEECMLPPPDSYPFLPNSAPRLPIRASSVAAGSIFASFFHLVLILL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60419g00042 199 PANTHER PROTEIN COBRA 7 183 IPR006918 GO:0010215|GO:0016020
Stsc60419g00042 199 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60419g00042 Stsc-Chr60419 247659 248489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60419g00042 19 174 COBRA Gene Family AT5G60920 64.103 3.06e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60419g00042 - - gmx:100813134 329.331