Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60419g00041 ATGGAATTTGATAATGGTGGCAAGCTCAAGTTGGTTACCTTGGCTGCTATATGCTTCATGATACTTTCACAAGCAGATGCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCTTGGACATCAGATGGCTATATGGCCACTGTGACAGTGCTAAACTTTCAACAATATAGGACAATCATGAACCCTGGATGGACAATAGGGTGGACATGGGCAAAGAAAGAGATAATATGGGCAGTGATGGGAGCTCAAGCAACAGAACAAGGTGATTGTTCCAAGTTCAAGTTGAAGATCCCTCACAGTTGCAAGAGGAACCCTCAGGTTGTTGACTTAATGCCTGGAGCACCTTTCAACATGCAATATAATAACTGCTGCAAAGGTGGTGTCCTGACTTCTTGGGGTCAGGACCCTGCCGGCGCCGTCTCGGCTTTCCAGATAGGTGTAGGCCTATCTGGAACCTCTAACAAGACGGTTAAGCTTCCCAAGAACTTCAAGCTTCTCGGTCCGGGGCCGGGGTACTCCTGTGGCCCTGCTAAGCTTGTGCCTGCCACTGTCATCCCAACTGATGATCATAGAAGGAAAGCTCAAGCTTTGAGTATGAAATACACTAACTCTCATTAG 639 0.4648 MEFDNGGKLKLVTLAAICFMILSQADAFDPLDPTGNVTIRWDIMSWTSDGYMATVTVLNFQQYRTIMNPGWTIGWTWAKKEIIWAVMGAQATEQGDCSKFKLKIPHSCKRNPQVVDLMPGAPFNMQYNNCCKGGVLTSWGQDPAGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKLVPATVIPTDDHRRKAQALSMKYTNSH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60419g00041 212 PANTHER PROTEIN COBRA 16 205 IPR006918 GO:0010215|GO:0016020
Stsc60419g00041 212 Pfam COBRA-like protein 51 205 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60419g00041 Stsc-Chr60419 246206 247183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60419g00041 25 204 COBRA Gene Family AT5G15630 71.667 1.58e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60419g00041 - - gmx:100813134 369.392