Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60419g00006 ATGTCGCTGAATATGAAAACCCTAACCCAAGCGCTGGCGAAGACCGCCGCGGTCATAGAGAAAACGGTTCAGACGACGGTGCAGGAGGTCACTGGGCCCAAAGCCCTCCAGGACTACGAGCTTCTTGACCAGATCGGCTCCGCCGGGCCGGGCTTGGCATGGAGGTTGTACTCTGGCCGGGCCAGGGACCCCTCGCGGCAGCACCAGTACCCGGTCGTGTGCGTCTGGGTGCTCGATAAGCGGGCCCTCTCTGAGGCCCGAATGCGGGCCGGGCTTACCAAGGCAGCCGAGGATTCGTTCCTGGATTTGATCCGCAAAGATGCTGCCAAGCTCGTGCGGCTAAGGCACCCCGGGGTGGTTCACGTGGTGCAGGCGCTTGACGAGAGCAAGAACGCCATGGCAATGGTCACCGAGCCTTTGTTTGCTTCGGTGGCTAATACTCTGGGAAATTTGGAAAATATTGCCAATGTTCCTAAGGAGCTCCGGGGAATGGAAATGTCACTGTTGGAGGTGAAGCATGGTTTACTTCAGATGGCAGAGACGTTGGACTTTCTCCACAACCAGGCTCATCTTGTTCATCGAGCTATATCACCCGAGAATATTCTTATTACTTTGAGTGGAGCATGGAAACTCAGTGGATTTGGTTTTGCAATTTCAGCTTCTGAGGCAAATGGTGACTCAGCTAATTTGCATGCCTTCCATTATGCTGAATATGATGTTGAAGACTCTGTTTTACCACTTCAGCCATCACTTAATTACACTGCTCCTGAGTTGGTGAGGAGCACTGCGCCTTCAGCAGGCTGGTCTTCTGATATTTTCAGTTTTGGATGTGTTGCCTACCATTTAATTGCTCGGAAATCTTTGTTTGACTGCCACAACAATGTGAAGATGTATACAAACACGTTGACTTACTTATCCAGTGATGCTTTCTCATCTATCCCACCGGAACTGGTTCATGACCTGCAAAGAATGATTTCTCCAAATGAGTCTTCCAGGCCAACAGCAATGGATTTCACAGGCTCTCCATTTTTTCGGAGTGACGCTAGATTGCGTGCTTTGCGGTTTCTCGATCACATGCTTGCGAGAGATAACATGCAGAAATCTGAGTTCTTAAAAGCTTTGTCAGACATGTGGAAAGATTTTGATTCCCGTGTATTGCGTTACAAGGTCCTTCCACCACTTTGTGCAGAACTACGGAATGTTGTGATACAGCCAATGATTCTACCAATGGTTCTAACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGAATGCAACACTTCCAGCCCTTGTACCTGTCCTGAGTAGTGCTTCTGGTGATACACTGTTACTACTTGTGAAGCATTCTGAGCTTATAATAAACAAGGCTAGCAAAGAGCATTTAATTTCACATGTTCTTCCAATGATTATTCGGGCCTATGATGATACTGATGTTCGTTTACAAGAGGAGGTCCTGAAAAAATCTGGGTCTCTTTCCAAGCAACTTGATGCCCAGCTGGTGCAACAAGTGATTTTACCCCGTGTCCATGGGTTAGCACTTAAAACAACAATTGCAGCGGTTAGAGTGAATGCTTTCCTTTGCCTAGGAGAAATGGTTAGCAGACTTGATAAACCTGCTGTCTTGGACATCTTACAAACCATTCAGCGGTGTACTGCTGTTGACCATTCTCCTCCAACCCTTATGTGTACCCTCGGGGTTGCAAATTCTATTTTTAAGCGGTTTGGTGTAGAATTTGTTGCTGAACATGTTCTTCCATTAATTGTGCCCCTATTGACTGCACAACAATTGAACGTCCAGCAGTTTGCCAAATATATGCTATTTGTCAAGGATATGCTCCAGAAGATTGAAGAGAAGCGTGGAGTAGCTGTGACTGGTTCTGGTATCCCAGAGGTAAAAGCACCGTCTCCCGTGGTTAATGGACTTCAAACTGAAGCACCAAGGGTGAGTAGCAACACTGTTGCTTCTTCAACCAAAAGCAGCTCCCCTTGGGATGAAGATTGGGGTTCCACAACAAAGGGAACTACCGCAGCTGTACAGAATTCTATTAACACATCCACTCAATCTGTGCTCAGCAACCCTATTGGCCATTTAACATCTTCACAAAATAATTTGCCATCATCTGCTGTTTCTAATCAGCAGGCAAGCAATTCGTGCCCCTCAGTAGATATAGAGTGGCCACCTCGTACATCTGTCGATAATACCCATCAAAACGGTGATGCTGAAAGGGGTGCAGTTGCAGGAGGAACCTTATCCACATCTAGTAGCCTTGCAGATATTGATCCCTTCGCCAATTGGCCTCCACGTCCTAGTGGCTCAACAGGTGGATCTGGAATTTCCAACAATGGTGCGTTTGGAACCCCAATGAATAAGATGACAAGCACTTCAAGCAATATGGGTCTCCCAATGAGCAACAATGGGAACAGTATGAGCATTTCGTCCACAGGTAGCCTTAATGGTGGTTTTCAACCTCAGAATTCTATTGGGTTCCAAAAACAGAGTCAACAGTTGCCTGCTTCGACTGGTTCATATAACAAGTCAACAGATCTCGGATCAATCTTTGCTTCCAACAAGAATGAGCAAAGTGCACTTAGACTCGCACCACCCCCTACAACCACAGTGGGTAGAGGAAGAGGCCGAGGAAGAGGGGCTCCTTCAACCACTAGGCCCTCTCAGACCAGGTCAAATTCTGAGCAGCCACCTCTTATGGATTTGTTGGGGTAG 2724 0.4721 MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKALQDYELLDQIGSAGPGLAWRLYSGRARDPSRQHQYPVVCVWVLDKRALSEARMRAGLTKAAEDSFLDLIRKDAAKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGNLENIANVPKELRGMEMSLLEVKHGLLQMAETLDFLHNQAHLVHRAISPENILITLSGAWKLSGFGFAISASEANGDSANLHAFHYAEYDVEDSVLPLQPSLNYTAPELVRSTAPSAGWSSDIFSFGCVAYHLIARKSLFDCHNNVKMYTNTLTYLSSDAFSSIPPELVHDLQRMISPNESSRPTAMDFTGSPFFRSDARLRALRFLDHMLARDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFENATLPALVPVLSSASGDTLLLLVKHSELIINKASKEHLISHVLPMIIRAYDDTDVRLQEEVLKKSGSLSKQLDAQLVQQVILPRVHGLALKTTIAAVRVNAFLCLGEMVSRLDKPAVLDILQTIQRCTAVDHSPPTLMCTLGVANSIFKRFGVEFVAEHVLPLIVPLLTAQQLNVQQFAKYMLFVKDMLQKIEEKRGVAVTGSGIPEVKAPSPVVNGLQTEAPRVSSNTVASSTKSSSPWDEDWGSTTKGTTAAVQNSINTSTQSVLSNPIGHLTSSQNNLPSSAVSNQQASNSCPSVDIEWPPRTSVDNTHQNGDAERGAVAGGTLSTSSSLADIDPFANWPPRPSGSTGGSGISNNGAFGTPMNKMTSTSSNMGLPMSNNGNSMSISSTGSLNGGFQPQNSIGFQKQSQQLPASTGSYNKSTDLGSIFASNKNEQSALRLAPPPTTTVGRGRGRGRGAPSTTRPSQTRSNSEQPPLMDLLG 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60419g00006 907 SUPERFAMILY Protein kinase-like (PK-like) 34 347 IPR011009 -
Stsc60419g00006 907 MobiDBLite consensus disorder prediction 643 676 - -
Stsc60419g00006 907 Gene3D Phosphorylase Kinase; domain 1 35 133 - -
Stsc60419g00006 907 MobiDBLite consensus disorder prediction 635 676 - -
Stsc60419g00006 907 Gene3D - 348 621 IPR011989 -
Stsc60419g00006 907 Pfam Protein kinase domain 104 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60419g00006 907 CDD PK_SCY1_like 45 346 - -
Stsc60419g00006 907 SUPERFAMILY ARM repeat 352 607 IPR016024 -
Stsc60419g00006 907 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 37 895 - -
Stsc60419g00006 907 Gene3D Transferase(Phosphotransferase) domain 1 134 347 - -
Stsc60419g00006 907 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60419g00006 907 MobiDBLite consensus disorder prediction 770 844 - -
Stsc60419g00006 907 MobiDBLite consensus disorder prediction 689 844 - -
Stsc60419g00006 907 MobiDBLite consensus disorder prediction 689 738 - -
Stsc60419g00006 907 MobiDBLite consensus disorder prediction 885 900 - -
Stsc60419g00006 907 MobiDBLite consensus disorder prediction 859 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60419g00006 Stsc-Chr60419 26147 34024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60419g00006 104 349 CBL-interacting serine-threonine protein kinases AT2G26980 26.295 1.70e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Stsc60419g00006 Pkinase 8.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60419g00006 K17541 - gmx:100796211 1353.96