Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60419g00004 ATGCCTAGAAGCCAACTCATGACCATGTTTGTGTTTCTCATAATACTTCTGCACATAGCCTTGGTATCCTCGTCAAATCTTCGACCGGGATATTACTCAAAGTCATGTCCAGAAGCTGAATCCATAGTCAGAGATGTCATGAAGAGGGCCCTCGTGCGGGAGCCAAGAAGTGTTGCTTCTGTCATGCGCTTCCAGTTCCATGATTGCTTTGTCAATGGGTGTGATGGTTCCATGTTGCTTGATGATACACCAACCATGCTAGGGGAGAAGCTGTCCCTGTCAAATATTAATTCACTTAGATCATATGAAGTTGTTGATGAAATCAAGGAGGCTCTTGAGGAGAAATGCCCTGATGTTGTTTCTTGTGCTGATATCATAATCATGGCATCAAGAGATGCTGTGGCACTGACCGGAGGACCCGATTGGGAGGTGAGGTTGGGAAGATTGGACAGTCTGACTGCAAGTCAAGAAGATGCAGACAACATCATGCCAAGCCCAAGAGCCAATGCAACCACTCTCATTGACCTTTTCGACAGATTCAATCTCTCTGTCAAGGACCTTGTGGCACTCTCAGGATCGCATTCCATCGGTGAAGGTCGATGTTTTTCGATCATGTTCCGGCTCTACAACCAATCTGGAACTGGAAAACCTGATCCTGCCATCAACCCCATGTTCAGGGAAGAACTCTACAACCTATGCCCCCTCGATGTCGATCAGAATGTGACTGGCAACCTTGATGCAACACCAACGTTGTTTGATAATCAGTATTTCAAGGACTTGGTTGCTGGGAGGGGGTTCCTCAACTCGGATGAAACACTCTTCACTTTCCCCCGGACGAGCAAGTTTGTGAGATTATATAGTAAGGATCAAAATGAGTTCTTCAGAGATTTTGTTGAAGGGATGCTGAAGATGGGTGACTTGCAGTCCGGCCGTCCTGGTGAGATTAGGAAGAATTGCAGGGTGGCCAACTCAGTGACCGTGGATCACCTGGTGGCTGAGCCTCAAAATAGGATGGAGAGTAACCATAAATCGATATAA 1038 0.4663 MPRSQLMTMFVFLIILLHIALVSSSNLRPGYYSKSCPEAESIVRDVMKRALVREPRSVASVMRFQFHDCFVNGCDGSMLLDDTPTMLGEKLSLSNINSLRSYEVVDEIKEALEEKCPDVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLTASQEDADNIMPSPRANATTLIDLFDRFNLSVKDLVALSGSHSIGEGRCFSIMFRLYNQSGTGKPDPAINPMFREELYNLCPLDVDQNVTGNLDATPTLFDNQYFKDLVAGRGFLNSDETLFTFPRTSKFVRLYSKDQNEFFRDFVEGMLKMGDLQSGRPGEIRKNCRVANSVTVDHLVAEPQNRMESNHKSI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60419g00004 345 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Stsc60419g00004 345 FunFam Peroxidase 30 172 - -
Stsc60419g00004 345 PANTHER PEROXIDASE 72-RELATED 21 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 Pfam Peroxidase 43 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 FunFam Peroxidase 164 304 - -
Stsc60419g00004 345 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Stsc60419g00004 345 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60419g00004 345 Gene3D - 30 323 - -
Stsc60419g00004 345 Gene3D Peroxidase, domain 2 164 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60419g00004 Stsc-Chr60419 16749 22116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60419g00004 7 331 Peroxidase AT2G22420 72.477 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60419g00004 K00430 - gmx:100796737 539.65