Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60418g00046 ATGGAAGATAAACTCAGCGAAGTTGTGTTGTTTGGGTCATGGTATAGCCCATACACATCAAGGGTAAAACTTGCCCTTAAACTTAAGGGCATACCCTTCAAATACGTGGAAGAAAATTTGTCAAACAAAAGCGAGTTGCTCCTCAAGTACAATCCTATCCACAAAAAGGTTCCAGTACTCTTGCACAATGGCATGCCAATTTGTGAGTCACTCATCATTCTAGAATATATTGATGAGGTTTGGAACCATGCTCCCAAACTCTTGCCAGAGGATCCTTACCAGAGGTCCAGGGTTCGTTTCTGGGCCAACTACACTGATCAAAAGATCATGCCAGCGAGCTATCCCCTCCTCTTACTGAAAGGAGAAAAGAAGCAAAAGGCAATTGAAGACATGGAAGAGATGCAGAGAGTGCTTGAAGAAGGTATCAAGCAAGATTTTCCTGAGCAATTCAGTTTCTTCAACGGCAAAACAATTGGACTCCTTGACATTTTTATGGGTGTAAATTGTTACAACTACAAAGCATTCCATGAAGTCACTAATTCAGAGATTATTGGACCCAAAAACCCTAAAATTTTCATGTGGGTAAATGCTCTGAAGGAACATCCTCTTATGAAAGATACACTTCCTCCACATGACAAGGTTGTTGCTATGCTTAAAACCATGATTGCTCCTACACCTGATGTCTGA 687 0.4105 MEDKLSEVVLFGSWYSPYTSRVKLALKLKGIPFKYVEENLSNKSELLLKYNPIHKKVPVLLHNGMPICESLIILEYIDEVWNHAPKLLPEDPYQRSRVRFWANYTDQKIMPASYPLLLLKGEKKQKAIEDMEEMQRVLEEGIKQDFPEQFSFFNGKTIGLLDIFMGVNCYNYKAFHEVTNSEIIGPKNPKIFMWVNALKEHPLMKDTLPPHDKVVAMLKTMIAPTPDV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60418g00046 228 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Stsc60418g00046 228 CDD GST_C_Tau 92 221 IPR045074 GO:0004364|GO:0006749
Stsc60418g00046 228 Gene3D Glutaredoxin 1 87 - -
Stsc60418g00046 228 ProSiteProfiles Glutaredoxin domain profile. 1 95 - -
Stsc60418g00046 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Stsc60418g00046 228 SUPERFAMILY GST C-terminal domain-like 79 222 IPR036282 -
Stsc60418g00046 228 CDD GST_N_Tau 8 81 - -
Stsc60418g00046 228 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Stsc60418g00046 228 Gene3D - 88 226 - -
Stsc60418g00046 228 Coils Coil 124 144 - -
Stsc60418g00046 228 SFLD Glutathione Transferase (cytosolic) 6 221 IPR040079 -
Stsc60418g00046 228 SFLD Main.3: Omega- and Tau-like 6 221 IPR045073 -
Stsc60418g00046 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc60418g00046 228 FunFam Tau class glutathione S-transferase 2 89 - -
Stsc60418g00046 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 215 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60418g00046 Stsc-Chr60418 376510 377985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60418g00046 1 219 Glutathione S-transferase Gene Family AT1G74590 42.727 3.85e-68 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60418g00046 K00799 - qsa:O6P43_025459 294.664