Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00069 ATGGACAAAGCTGAGAGAGAGACGCACGACTTCATGAACGTCGACTCTTTCTCTCAGCTTCCCTTCATCCGCCCTGCCCCTCCTCCCAAAGAAAAGGGCATCAGACTCTTTGGCATAGAATTTGGCGACGCGCCGCCAGCTTCTGCTGCCGAAGAGTCTGAGTCCGCTGACACAACCACTAACGAAAACAGCACCACCAACAACAACTTAGACACTAATAATAATAACAACAGTAGTAGTAATAACGGCGAGAGTAGCCGGAGGTTCGAATGCCACTACTGCTGTAGAAACTTTCCGACTTCTCAAGCCCTCGGCGGACACCAAAACGCACACAAGAGAGAGAGGCAACACGCGAAACGACAACACCTTCAGTCAGCCATGGTTCACGGTTCTCTCCCTGAAGGACAGCACCACCAACTTTACGGACTCATGAACTACAGGTTCGGATCTTTCGGTTCTTCTCCAACAATGGCTGCTTATCCAACATGGAATAACAATAACACCGCTGCTGGAAGGTTCTACGGAACTTCCTCATCTTATTCTCCTTCTTCTCAGCATCTTCAGCAACCCATCAATGGTAGCCCCTTGTCCCTATGGCGAATCCCTAGCGGCGGCGGCGGCGGCGGTGGAGGTAGTAATAACCCTATGTTTGGGCGGGAACGGGCGCCGCATAATCCATTTGGTTTGGTTGCAGGGGAAGATTTGAACGGAAGAATAGGAGCAGCAACAAGGGTCCAATTAGGTGGCAGTAATAATAATAATAATGGTTCACAAAACGGGTATGTTTATGACTCCAAAACAAGCGTTAGTGACCATCTCAGCTTGGATCTTCATCTGTAA 840 0.4929 MDKAERETHDFMNVDSFSQLPFIRPAPPPKEKGIRLFGIEFGDAPPASAAEESESADTTTNENSTTNNNLDTNNNNNSSSNNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSAMVHGSLPEGQHHQLYGLMNYRFGSFGSSPTMAAYPTWNNNNTAAGRFYGTSSSYSPSSQHLQQPINGSPLSLWRIPSGGGGGGGGSNNPMFGRERAPHNPFGLVAGEDLNGRIGAATRVQLGGSNNNNNGSQNGYVYDSKTSVSDHLSLDLHL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00069 279 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Stsc60417g00069 279 MobiDBLite consensus disorder prediction 52 83 - -
Stsc60417g00069 279 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Stsc60417g00069 279 MobiDBLite consensus disorder prediction 1 83 - -
Stsc60417g00069 279 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Stsc60417g00069 279 PANTHER ZINC FINGER PROTEIN GIS 1 279 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00069 Stsc-Chr60417 342351 343190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00069 1 279 C2H2 Transcription Factor Family AT2G41940 38.851 8.15e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00069 - - vun:114190818 238.81