Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00054 ATGGAAGGTACCATAATTTTGTCAGTGGTGATAATAACACTTGTTCATCCATCAAATGCTCAATTGAGTTCAAGCTTCTACAGCAGCACATGCCCCAATGTGTCTTCCATTGTGAGGAGTGTGGTTCAGCAAGCTTTGCAATCTGATCCTCGCATTGGCGCAAGCCTAACTCGCCTTCATTTCCATGATTGCTTTGTCAATGGGTGTGATGCATCAGTATTGTTGGACCAAGGTGGTAACATAACACTGAGCGAGAAGAATGCAGTTCCAAACAATAATTCAGCTCGTGGATTTGATACAGTTGACAGAATCAAGAGCGCTGTTGAAAACTCATGCCCTGCTGTTGTGTCCTGTGCTGATATTCTTGCCCTTGCAGCTGAAGCTTCTGTCTCTTTAGGAGGAGGTCCTTCATGGAACGTTCTTCTTGGCAGAAGGGATGGCCTAATTGCAAACCAATCAGGTGCCAATAATTCCATCCCCACTCCATTTGAAAGCTTAGCCAATGTCACTGCCAAATTCGCCGCTGTTGGCCTCAACATAACTGATCTCGTTGCATTATCCGGAGCGCACACGTTCGGGCGAGCGCAATGTCGGTTTTTCAACCAGAGATTATTCAACTTCAGCGGAACGGGCAGCCCTGATCCTACTCTGAGCCCATCTTATTTGACAAGCCTGCAGCAGATGTGTCCGCAGAATAATGGAAGCAGCAATAACACACTCAACAATCTGGACCCTTCATCTCCGGACACATTCGACAACAATTACTACTCTAACCTCATTAACAACCGGGGCCTCCTCCAGACTGATCAGGAGCTGTTCTCCTCCAACAACAGCGCCGCCATGTCCATTGTCAACACCTTCGCCAACAACCAGACCGCGTTCTTTCAAGCCTTTGCTCAGTCCATGATCAACATGGCCAACATTAGCCCTTTGATTGCACCCCAGGGTCAAATCAGGTCCAACTGTAGGAAACTCAATGGAAACTGA 987 0.4732 MEGTIILSVVIITLVHPSNAQLSSSFYSSTCPNVSSIVRSVVQQALQSDPRIGASLTRLHFHDCFVNGCDASVLLDQGGNITLSEKNAVPNNNSARGFDTVDRIKSAVENSCPAVVSCADILALAAEASVSLGGGPSWNVLLGRRDGLIANQSGANNSIPTPFESLANVTAKFAAVGLNITDLVALSGAHTFGRAQCRFFNQRLFNFSGTGSPDPTLSPSYLTSLQQMCPQNNGSSNNTLNNLDPSSPDTFDNNYYSNLINNRGLLQTDQELFSSNNSAAMSIVNTFANNQTAFFQAFAQSMINMANISPLIAPQGQIRSNCRKLNGN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00054 328 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Stsc60417g00054 328 PANTHER PEROXIDASE 72-RELATED 18 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 FunFam Peroxidase 160 305 - -
Stsc60417g00054 328 SUPERFAMILY Heme-dependent peroxidases 21 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 FunFam Peroxidase 25 172 - -
Stsc60417g00054 328 Gene3D Peroxidase, domain 2 160 305 - -
Stsc60417g00054 328 CDD secretory_peroxidase 21 324 IPR033905 GO:0004601|GO:0042744
Stsc60417g00054 328 Pfam Peroxidase 38 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 ProSiteProfiles Plant heme peroxidase family profile. 21 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 Gene3D - 25 326 - -
Stsc60417g00054 328 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60417g00054 328 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00054 Stsc-Chr60417 218274 219738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00054 2 327 Peroxidase AT5G06720 67.378 1.16e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00054 K00430 - gmx:100810355 521.931