Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00052 ATGAGGATCCGCAAAAGGCATGCACTTTTATCTTCCTCACACTTCCCGGCCGCTCCTTCATCAGATCCCCACCCCAACGTCAACGAACAAGGCCTGGTGCAACTCACCGCTGCTTCCACCACCGCAACGCTGCCTTCTTCGTCACTGAGTCTCCACCACCGAGAACGTGGCTCCTCCCGTGTTTTGAGCTCGGATCCTGGTGGTCGGCCGTCTGATCAAGCGGTGGCTCCGATCAAGGGCTGGGATGATTCCTCCGGTGAGAGTGGGGCACACAGACAGCACATCAAGCAAGACCCTTCGGTGGAGGATAATGATGATGATGGAAGAAGAGAAGACTCGGAGGAGGAGAAGAAGAAATTAAGTAATGATTGGAGGAAAGGAGGCATCTTTGGTTCACTCCCACCACCACCACCGCCGCCGCCGCCGCCACCGTTGAAGTTGTATTCTTCCCCCACTCCTCAAGAAGATGAGCGATGGTGTGAGGAAGAGAAAGCGATTCCTTTCAAGAAACGAAGAGGGACCTTTGACATGAACGATGCTAATAAGAAGACCAAAGGCAAGATGAAGACCAAGATGAACAACAAGTGCAGTAATAGTAATACTAGTGAAGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGTGAAGGTGAAGGTGAAAGGGAAGAAGAGGGGAAGAGGTAGTGCAGTGATGGAAGGATCTCGGTGCAGTCGGGTCAACGGAAGAGGTTGGAGGTGTTGCCAACAGACTCTTGTTGGTTACTCTCTTTGTGAGCATCACTTGGGGAAAGGAAGGCTCAGAAGCATGACAAGTGTCAGAAACCGTTCTTCTACTACTACTGCTGCTGCTGCACCAACAACCACCACAACCAATAATAATAAGCCCATCATCAAGGAGGAGGAGGAAGACAAGAGAAGAAAGATGATAATGGGTGGAGGTGGAGGTGGAGGTGGAGGTGGTAGTAGCAAGAAGAAGATGAAGCAGCTTGGAATGGTGAAAGCTCGATCCATAAACAGCTTACTGGGCCAAACAAGTAATAACACACCCATTACTACTAACAAGTAA 1068 0.5056 MRIRKRHALLSSSHFPAAPSSDPHPNVNEQGLVQLTAASTTATLPSSSLSLHHRERGSSRVLSSDPGGRPSDQAVAPIKGWDDSSGESGAHRQHIKQDPSVEDNDDDGRREDSEEEKKKLSNDWRKGGIFGSLPPPPPPPPPPPLKLYSSPTPQEDERWCEEEKAIPFKKRRGTFDMNDANKKTKGKMKTKMNNKCSNSNTSEEEEEEEEEKEEKVKVKVKGKKRGRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSSTTTAAAAPTTTTTNNNKPIIKEEEEDKRRKMIMGGGGGGGGGGSSKKKMKQLGMVKARSINSLLGQTSNNTPITTNK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00052 355 MobiDBLite consensus disorder prediction 14 52 - -
Stsc60417g00052 355 PANTHER EXPRESSED PROTEIN-RELATED 147 342 - -
Stsc60417g00052 355 ProSiteProfiles WRC domain profile. 231 275 IPR014977 -
Stsc60417g00052 355 MobiDBLite consensus disorder prediction 131 149 - -
Stsc60417g00052 355 MobiDBLite consensus disorder prediction 304 328 - -
Stsc60417g00052 355 MobiDBLite consensus disorder prediction 85 124 - -
Stsc60417g00052 355 Pfam WRC 233 273 IPR014977 -
Stsc60417g00052 355 MobiDBLite consensus disorder prediction 155 186 - -
Stsc60417g00052 355 MobiDBLite consensus disorder prediction 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00052 Stsc-Chr60417 212521 214427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00052 233 298 GRF Transcription Factor Family AT4G37740 33.333 5.46e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00052 - - aip:107645407 315.849