LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60417g00037	ATGGCCAAGCACCAATTAGATCTCGCCGATCGCCGCAGCACCGCAACCAACACCAAGCTCCGTCGTCACCATGCCTCTGATCATCGAACCCGTCAAGGTCTTCGTTCTCGCTACCTTGCCTTCAACAACATGATTAATGATGAGAAGGACGAAATCGCAAGGGCTGACTCCGTCAAGTTTGATTTGGTATTTGGCGAAATGGAGAGGTTGCATCAACTAGTTACAAAACCAAGAGAACAAGTTGCTGATGCAAAGGCTCTGTTGGACATAACCAAATGCTTGGTAATGTCTGTGAAGGGTCATGCTAATGGTGGACTCACTCCTTCAGAATTTGTATCTCGTATTCTGCAAGAATTCGGTCAACATGGTGGACTCAGTACTGGCACCAGAAACTCAATAGCTTGGAATGATGTTGGACTATCAGTATCACATATTTTTAAAGCGGCTTCTGGCTGCTCTACAATGAATGGCCTCATTTATGCTAAACCAAGGCAGAGGAAGGCTGTTAATCGTGCAAGTAGGAAGCATGTAAGGCCCAATGAATTGGCCCGGCCGGAAGAGCTTGGCGGAGGTCCAAGAGAAGAGAGAGCTGATACAGATAAAAATATGTTAACTATGTTTAATATCTTAAGGAAAAATAGAGTTGTTAGGCTTGAGAATCTGATTTTGAATAGGAACTCCTTTGCTCAAACAGTGGAGAATTTATTCGCTTTATCATTCTTAGTCAAAGATGGACGGGCTGAAATCAAAGTCAATGAGGCTGGATTGCAGCTAGTAGTATCACCTAGAAATGCCCCTCGTGCTAATGCAGTTCGTGCTGGTGATGTTGCTTTCAGTCACTTTGTGTTCAGGTTGGATTTTAAGGACTGGAAGCTGATGATCGACTCTATTGGGGTTGTGGAGGATCTAATGCCTCATAGAGAATAG	927	0.4423	MAKHQLDLADRRSTATNTKLRRHHASDHRTRQGLRSRYLAFNNMINDEKDEIARADSVKFDLVFGEMERLHQLVTKPREQVADAKALLDITKCLVMSVKGHANGGLTPSEFVSRILQEFGQHGGLSTGTRNSIAWNDVGLSVSHIFKAASGCSTMNGLIYAKPRQRKAVNRASRKHVRPNELARPEELGGGPREERADTDKNMLTMFNILRKNRVVRLENLILNRNSFAQTVENLFALSFLVKDGRAEIKVNEAGLQLVVSPRNAPRANAVRAGDVAFSHFVFRLDFKDWKLMIDSIGVVEDLMPHRE	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60417g00037	308	Pfam	Nse4 C-terminal	216	303	IPR014854	-
	Stsc60417g00037	308	MobiDBLite	consensus disorder prediction	169	197	-	-
	Stsc60417g00037	308	MobiDBLite	consensus disorder prediction	1	31	-	-
	Stsc60417g00037	308	PANTHER	UNCHARACTERIZED	13	307	IPR027786	GO:0005634\|GO:0006281\|GO:0030915
	Stsc60417g00037	308	MobiDBLite	consensus disorder prediction	174	197	-	-
	Stsc60417g00037	308	MobiDBLite	consensus disorder prediction	1	16	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60417g00037	Stsc-Chr60417	156158	158698	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60417g00037	31	308	Non-SMC Element family	AT1G51130	51.418	1.74e-93	281

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60417g00037	K22825		-	gmx:100781485	369.007