Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00035 ATGGCCAAGCACCAATTAGATCTCGCCGATCGCCGCAGCACCGCAACCAACACCAAGCTCCGTCGTCACCATGCCTCTGATCATCGAACCCGTCAAGGTCTTCGTTCTCGCTACCTTGCCTTCAACAACATGATTAATGATGAGAAGGACGAAATCGCAAGGGCTGACTCCGTCAAGTTTGATTTGGTATTTGGCGAAATGGAGAGGTTGCATCAACTAGTTACAAAACCAAGAGAACAAGTTGCTGATGCAAAGGCTCTGTTGGACATAACCAAATGCTTGGTAATGTCTGTGAAGGGTCATGCTAATGGTGGACTCACTCCTTCAGAATTTGTATCTCGTATTCTGCAAGAATTCGGTCAACATGGTGGACTCAGTACTGGCACCAGAAACTCAATAGCTTGGAATGATGTTGGACTATCAGTATCACATATTTTTAAAGCGGCTTCTGGCTGCTCTACAATGAATGGCCTCATTTATGCTAAACCAAGGCAGAGGAAGGCTGTTAATCGTGCAAGTAGGAAGCATGTAAGGCCCAATGAATTGGCCCGGCCGGAAGAGCTTGGCGGAGGTCCAAGAGAAGAGAGAGCTGATACAGATAAAAATATGTTAACTATGTTTAATATCTTAAGGAAAAATAGAGTTGTTAGGCTTGAGAATCTGATTTTGAATAGGAACTCCTTTGCTCAAACAGTGGAGAATTTATTCGCTTTATCATTCTTAGTCAAAGATGGACGGGCTGAAATCAAAGTCAATGAGGCTGGATTGCAGCTAGTAGTATCACCTAGAAATGCCCCTCGTGCTAATGCAGTTCGTGCTGGTGATGTTGCTTTCAGTCACTTTGTGTTCAGGTTGGATTTTAAGGACTGGAAGGTATGCATATGTTTATTAACTTTGATGCCGTTAATGTTTTGGGTGTATGTGACTATGTGCTATGGAAGGTTAACTTTCTCTGCTTCCTCTTCAGTTTATATTATTATTTATGGACTATGGTGGGGATATTCATATTCTACCCAACTTTTAGCAATCAAGTGGTTATGTGGAACTATAACGTTTATATCTTCTAGGATCATTCAGGACTTGAACTTGAAACTTGTCATCGAGCTATAA 1110 0.4207 MAKHQLDLADRRSTATNTKLRRHHASDHRTRQGLRSRYLAFNNMINDEKDEIARADSVKFDLVFGEMERLHQLVTKPREQVADAKALLDITKCLVMSVKGHANGGLTPSEFVSRILQEFGQHGGLSTGTRNSIAWNDVGLSVSHIFKAASGCSTMNGLIYAKPRQRKAVNRASRKHVRPNELARPEELGGGPREERADTDKNMLTMFNILRKNRVVRLENLILNRNSFAQTVENLFALSFLVKDGRAEIKVNEAGLQLVVSPRNAPRANAVRAGDVAFSHFVFRLDFKDWKVCICLLTLMPLMFWVYVTMCYGRLTFSASSSVYIIIYGLWWGYSYSTQLLAIKWLCGTITFISSRIIQDLNLKLVIEL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00035 369 PANTHER UNCHARACTERIZED 13 294 IPR027786 GO:0005634|GO:0006281|GO:0030915
Stsc60417g00035 369 MobiDBLite consensus disorder prediction 169 197 - -
Stsc60417g00035 369 MobiDBLite consensus disorder prediction 1 31 - -
Stsc60417g00035 369 Pfam Nse4 C-terminal 216 294 IPR014854 -
Stsc60417g00035 369 MobiDBLite consensus disorder prediction 174 197 - -
Stsc60417g00035 369 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00035 Stsc-Chr60417 156158 158698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00035 31 346 Non-SMC Element family AT1G51130 46.875 2.00e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00035 K22825 - gmx:100781485 350.132