Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00031 ATGTACCAATATGAGTACGGAAGTAATAGTGAGTGTTGGGAACAGGACATGGGAAGAATAATGATGAACAAGGGTGAGTTTGTTGGATCAGAACAAGAACAAGATCAGAGTTATGAGCCTTACTTCAGACCACTACAGTATGATGAGGTACCTGTTGCTGCTTGGAACTTTGAGCTTCCATTAATGACAGGAACAGGAGCTATTGATGCAGTTGAGTCTTGTTCCATATTGTGTAGTAGTAGCAGTAGTAGTGCAGATAGCTATTCCTCTTCTGAGAAATGCAAAAATGTTCCTTCTTCTTCATACTCTCATGAGAAGCACAATAGTGCTAGTGATTTTCAGCCTCCTCTTCCTGCTGCTGCTAATGATGTGCTAATCTTCCATCAACAATATCATCATAACAATAATAAACTAGTCATGGGTGATCATGATGATGATGATGCTACAGATCATAAGAAGCCCAGCCCCCTTCAAATTTGCTTCCAAAAGAATCAGACAGAAAAGCAAGAGTATGTGATGAGTGGTTGTAGCAACTCTGGTTATAGGAGAGGTCCATCATCATTATCAGTTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAGCCATTCATGACGGTTGTTAATCGCCTTGGTGGTCCTCATAAGGCAAAGCCTAAGGCTATATTAGACATGATGAAATCAGATTTGTTGTCAATTACACACATTAAAAGTCACTTGCAGAAATACAGGTCTACTATATGCCACCACAAAGCTTCGCATGAAAGATCGTTTGAGGAAGGAGATAAAACAGATGTCACTCATCTTCAACACAAGATACAAATGCAAATTGAGGAATCACAACAACTTCAACAAGAGGTCCGCAGGAGTATTCATCAACAACTAGAGATGCAACGAAATTTGCAAGTGCTGATTGAACAGCAAAGGGAGCAGCTCAAGATGATGTTACAACAACAAAAGGAAAGAAAGAAATTAAATAATAACCCTTAG 990 0.3919 MYQYEYGSNSECWEQDMGRIMMNKGEFVGSEQEQDQSYEPYFRPLQYDEVPVAAWNFELPLMTGTGAIDAVESCSILCSSSSSSADSYSSSEKCKNVPSSSYSHEKHNSASDFQPPLPAAANDVLIFHQQYHHNNNKLVMGDHDDDDATDHKKPSPLQICFQKNQTEKQEYVMSGCSNSGYRRGPSSLSVKRRIRWTKDLHEPFMTVVNRLGGPHKAKPKAILDMMKSDLLSITHIKSHLQKYRSTICHHKASHERSFEEGDKTDVTHLQHKIQMQIEESQQLQQEVRRSIHQQLEMQRNLQVLIEQQREQLKMMLQQQKERKKLNNNP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00031 329 Coils Coil 266 286 - -
Stsc60417g00031 329 SUPERFAMILY Homeodomain-like 190 246 IPR009057 -
Stsc60417g00031 329 Gene3D - 190 247 - -
Stsc60417g00031 329 MobiDBLite consensus disorder prediction 82 115 - -
Stsc60417g00031 329 MobiDBLite consensus disorder prediction 82 110 - -
Stsc60417g00031 329 Coils Coil 298 322 - -
Stsc60417g00031 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 186 322 IPR044848 GO:0003700
Stsc60417g00031 329 NCBIfam myb-like DNA-binding domain, SHAQKYF class 191 245 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00031 Stsc-Chr60417 131592 133595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00031 186 321 G2-like Transcription Factor Family AT3G04450 41.429 9.74e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc60417g00031 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00031 - - aip:107647908 386.341