Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00025 ATGGCAGGACCTCCTTTCTACGCCTCCTGTCTTTCCTCCTCCAGCAATTTGGGGACATCTTGCTTCGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGAACACTACGCTTGAGGAGCAGTCTTACAATAAAAGCAGAAGTGAAGTTTGTTAATGCAGAAGAAGCAAAGGATCTTGTAAAAGTTGATGGATATACTGTTCTTGATGTACGTGACAAAACTCAGTTTGAGAGAGCTCACATAAAATCCTGCTATCATGTGCCTCTCTTTGTTGAAAATCAAGACAATGATCCTGGTACAATTATAAAAAGGACTCTACATAATAATTTCTCCGGTTTGTTCTTCGGATTACCGTTCACCAAGCCGAATCCCAATTTTGTACAATCTGTCAAGAGTCAGTTTTCACCTGAGACTAAACTTCTGCTTGTGTGTCAGGAAGGACTGAGGTCTACTGCAGCTGCAAACAAACTAGAGCAGGCCGGATTCTCAAATGTAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGGACATTTGATTCCGTGGGCTCCAAGGAGTTGCAAGATGCGGGCAAAGCTGGTTTGGTGACAATCCAAGGGAAAATCTCAACTGTATTGGGAACAATTCTTGTTTGTGCATATTTGTTCATTACCTTCTTCCCTGACCAAGCAGAGAAGATATTCCAAATGGTCCCTGCAGGCTAA 708 0.428 MAGPPFYASCLSSSSNLGTSCFVLKTHNARAVPGTLRLRSSLTIKAEVKFVNAEEAKDLVKVDGYTVLDVRDKTQFERAHIKSCYHVPLFVENQDNDPGTIIKRTLHNNFSGLFFGLPFTKPNPNFVQSVKSQFSPETKLLLVCQEGLRSTAAANKLEQAGFSNVACITSGLQTVKPGTFDSVGSKELQDAGKAGLVTIQGKISTVLGTILVCAYLFITFFPDQAEKIFQMVPAG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00025 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 6 234 IPR044615 -
Stsc60417g00025 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 173 IPR036873 -
Stsc60417g00025 235 SMART rhod_4 51 181 IPR001763 -
Stsc60417g00025 235 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 38 180 - -
Stsc60417g00025 235 Pfam Rhodanese-like domain 53 173 IPR001763 -
Stsc60417g00025 235 Gene3D - 38 180 IPR036873 -
Stsc60417g00025 235 CDD RHOD 55 176 - -
Stsc60417g00025 235 ProSiteProfiles Rhodanese domain profile. 61 184 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00025 Stsc-Chr60417 108962 110558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00025 9 229 Sulfurtransferasese or Rhodanese AT2G42220 68.778 5.38e-114 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00025 - - adu:107492903 427.557