Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00014 ATGCACCTCTACCTCGGCTCTGCCTCTTGCGTCGTTGCTTCCACCGCCGAAGCTGCCAGAGAGTTCCTCAAGAACCACGAAACCTCCTTCTCCGACCGCCCCGCGGAAACCATGGCCGTGGAGAGCCTAACCTATGGGTTCAAGGACTTCATGTTCGCCCCGTACGGACATTACTGGAGGTTCATGAAGAAGTTGTGCATGTCGGAGCTCCTGGGCGGCCAAATGCTGAAGCAGCTCCTCCACGTGAGGCAGCAAGAGAGGAAGAGGTTTCTGAGTGCTCTGTTGAAGAAAGGTGAGGCCGGTGAGGCGGTGGATCTTGGAGGAGAACTGGTGATGCTGTCCAATAACGTGATATCGAGGATGACGATGAGGCGAACGAATGAAGGGGAGGAGGAGGTGGTGAGGAAGGTGGTGGCGGACACGGTGGAGCTGAGCGGGAAGTTTAACTTGTCTGACTTCTTGTGGTTCTTGAAAGGTCTTGATGTTCAGGGATTCAACAAGAGGCTTAAGGAGGTTCGTGTAAGGTTTGATGCCTTGCTGGACAGAGTGATTGAGGAGCATCAACATGAACATGAAAGAACACAGAACAAGGAAGAGGACATACTTGATGTATTGCTGCAAATCTCTGAAGATGAGAACGCTGAGGTCAAATTAGACATGGACAACATCAAGTCCTTCATCATGGACATACTAGTGGCAGGGACGGACACAACAGCTGTGACAATGGAATGGGCAATGGCAGAGCTGATCAACAACCAGAGAGTGATGGAGAAAGCACGTGAAGAGGTTGATGCAGTGATTGGAAAGAAGAGAGTAGTTGAAGAATCAGACATTGGCAACCTTCCTTACATTCAAGCCATTGTGAAAGAAACATTAAGGCTTCACCCTGCAGGTCCATTGATTGTTAGAGAAACTTCTAAAAGGGTGGTAGTTAATGGTTATGACATTCCAGCAAAGACTCGCTTGTTTGTGAATGCATGGTCCATTGGAAGGGACCCAAACCACTGGGATAATCCCCTTGATTTCAGGCCTGAGAGATTCATTGATGAACATGGGAATATTGTGAGCCATTTGGATGTAAGGGGACAACACTTTGAGTTGATTCCATTTGGAAGTGGAAGAAGAATGTGCCCTGGAATCTCTCTTGCCTTGCCGCTTCTCCATGCCACCCTAGCTGCTATTGTTCAGTGCTTTGAATTGAAGGTTGATGGGATCCTTGACATGGAAGAGAAGCCCGGGCTTGTTGTTCCTAGGGCTCACCCTCTGATTTGTGTCCCTCTTTCTAGGATTCATCCATTTCCTTCTATATGA 1311 0.4867 MHLYLGSASCVVASTAEAAREFLKNHETSFSDRPAETMAVESLTYGFKDFMFAPYGHYWRFMKKLCMSELLGGQMLKQLLHVRQQERKRFLSALLKKGEAGEAVDLGGELVMLSNNVISRMTMRRTNEGEEEVVRKVVADTVELSGKFNLSDFLWFLKGLDVQGFNKRLKEVRVRFDALLDRVIEEHQHEHERTQNKEEDILDVLLQISEDENAEVKLDMDNIKSFIMDILVAGTDTTAVTMEWAMAELINNQRVMEKAREEVDAVIGKKRVVEESDIGNLPYIQAIVKETLRLHPAGPLIVRETSKRVVVNGYDIPAKTRLFVNAWSIGRDPNHWDNPLDFRPERFIDEHGNIVSHLDVRGQHFELIPFGSGRRMCPGISLALPLLHATLAAIVQCFELKVDGILDMEEKPGLVVPRAHPLICVPLSRIHPFPSI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00014 436 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 423 - -
Stsc60417g00014 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 370 379 IPR017972 GO:0005506|GO:0016705
Stsc60417g00014 436 Gene3D Cytochrome P450 1 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS E-class P450 group I signature 285 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS E-class P450 group I signature 377 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS E-class P450 group I signature 367 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS E-class P450 group I signature 325 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS E-class P450 group I signature 222 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS E-class P450 group I signature 242 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 Pfam Cytochrome P450 2 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 FunFam Predicted protein 231 424 - -
Stsc60417g00014 436 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 PRINTS P450 superfamily signature 368 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 SUPERFAMILY Cytochrome P450 2 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00014 436 CDD CYP93 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00014 Stsc-Chr60417 63773 65809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00014 1 429 Cytochrome P450 AT5G06900 48.506 1.13e-149 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00014 K24188 - gmx:100815706 593.578