Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00012 ATGGCTGGTAGTTATGATTACAAAGATTACATTCAATTTTTCATGATATGGCTAATCTCCACAATCATAGTTAGAGCTATATTCAACAGAAAACAGAACAAGTCTCATAATAAACCACCAAGTCCACTGTCCCTTCCTATAATTGGACACCTTCACCTTCTTGCTCCAATTCCTCACCAAGCCCTTCACAAACTCTCAATCCGCTATGGCCCCATAATGCACATTAAACTTGGTTCTGTCCCTTGTGTAGTAGCTTCCACACCAGAAGCTGCAAAAGAATTCCTCAAGACTCATGAATCCTCCTTCTCAAACCGGCCTCGAAATCTCGCTGTTGATTATCTTACATATGGTTCTAAAGACTTCTCCTTCGCCCCATATGGACCTTACTGGAAGTTCATGAAGAAGATTTGCATGTCTGAACTTCTTGGCGGCCACACTCTAAACCAGCTTTTACCATTGAGGAGGCAAGAGACAGAAAGATTCTTGAGGCTATTGCTTAAGAAAGGGATGGCTGGTGAGGCTGTTGATGTTGGAGGAGAGCTACTGACGCTTTCAAATAACGTTATCTCAAGGATGATCATGAGCAAGACGCATATGGAAGATGAAGCTGAGGCTGAGGAGGTGAGGAAGCTGGTGCAGGATACAGCAGAGCTTACTGGGAAGTTTAATGCTTCGGATTACATTTGGTTCCTCAAGAACTGGGACTTGCAGGGTTTTAGAAAAAGGGTAGAGGAGATTCGGAACAGGTTTGATTCCATGACGGAGAGAGTGATCAAGGAGCATCAAGAGGAAAGGAGGAAGCAGCAGAAGGAAGGTCAAGATTGTGAAATCAAGGACCTACTTGATATATTATTGGACATACATGAAGATGAAAACTCTGAGATACGTTTGACTAAAGAGAATATCAAGGCCTTCATCTTGGACATATTTATAGCAGGAACAGATACTTCAGCATTAACTATAGAGTGGGCTCTAGCTGAGTTGATCAATCACCCTCATGTGATGGAGAGGGCAAGGGAAGAGATTAAAAATGTGGTTGGAAATAATAGAATAGTACAAGAATCAGACATTGTCAACCTTCCCTATCTTCAAGCCATAGTAAAAGAAACACTGAGACTTCACCCAACAGGTCCAATGACAGTTAGAGAATCATCTCAGAGCTGCACCATATGGGGCTATGAGATTCCAGAGAACACACAGTTGTTTGTTAATATTTGGGCCATTGGAAGGGACCCAATTTATTGGGAAAACCCACTGGAGTTCAAGCCAGAAAGGTTTCTTACTGAAGAAAAAGGGATGAGCCAGTTAGATGTAAGGGGGCAACACTTCCATATGATTCCATTTGGGAGTGGTAGAAGAGGATGCCCTGGAACATCACTAGCTTTGCAAGTTGTTCAAGCTAACCTCGGTGCAATGGTGCAGTGCTTTGAATGGAAGATTAGTGGTGATACCAATAATGAGATTGTTGATATGGAAGAAAAACCAGGGTTAACTCTTTCAAGGACTCATCCCTTGATTTGTGTACCCCTCCCTAGACTTAGTCCTTTTCCTCCCATGTGA 1560 0.4256 MAGSYDYKDYIQFFMIWLISTIIVRAIFNRKQNKSHNKPPSPLSLPIIGHLHLLAPIPHQALHKLSIRYGPIMHIKLGSVPCVVASTPEAAKEFLKTHESSFSNRPRNLAVDYLTYGSKDFSFAPYGPYWKFMKKICMSELLGGHTLNQLLPLRRQETERFLRLLLKKGMAGEAVDVGGELLTLSNNVISRMIMSKTHMEDEAEAEEVRKLVQDTAELTGKFNASDYIWFLKNWDLQGFRKRVEEIRNRFDSMTERVIKEHQEERRKQQKEGQDCEIKDLLDILLDIHEDENSEIRLTKENIKAFILDIFIAGTDTSALTIEWALAELINHPHVMERAREEIKNVVGNNRIVQESDIVNLPYLQAIVKETLRLHPTGPMTVRESSQSCTIWGYEIPENTQLFVNIWAIGRDPIYWENPLEFKPERFLTEEKGMSQLDVRGQHFHMIPFGSGRRGCPGTSLALQVVQANLGAMVQCFEWKISGDTNNEIVDMEEKPGLTLSRTHPLICVPLPRLSPFPPM 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00012 519 Coils Coil 258 278 - -
Stsc60417g00012 519 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 SUPERFAMILY Cytochrome P450 39 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Stsc60417g00012 519 Gene3D Cytochrome P450 28 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 FunFam Cytochrome P450 family protein 30 507 - -
Stsc60417g00012 519 Coils Coil 236 256 - -
Stsc60417g00012 519 Pfam Cytochrome P450 39 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00012 519 CDD CYP93 70 509 - -
Stsc60417g00012 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00012 Stsc-Chr60417 59117 61024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00012 6 512 Cytochrome P450 AT5G06900 48.431 3.45e-180 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00012 K24188 - gmx:100779342 822.002