Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00011 ATGGCTGCTAATAATAGTGTTTTGCTCTACATCTTGTCATCGTTAGGTCTAGTTGTTTTCACTTCACTCCTCAAGTACCTGATTGGCAAAACAAGTAGCACAAACAGAATTAAAACCCCACCATGTCCACCATCACTACCAATAATTGGACACCTTCACCTTATAGGCTCAGTTATACCAAAATCATTCCATGCCTTAGCTAAACTCCATGGCCCTCTCATTCAGCTTCGTTTGGGTGCTTCAACTTGCGTACTTGTCTCCAACGTACAAGTTGCAAAGCAAGTGTTGAAAACCAATGAAATCAATTTCGTCAACAGACCTCACTTTGGATCCTCTGAGTACTACCTCTATAAAGGCTTCGGTTTTGTTATGGAACCATATGGGCCTTACTGGAGGTTCATGAAGAAGCTATGCATGACTCAACTTCTCTCGAGTTCTCAGCTTGGGAGATTCATGCACATAAGAGAACAAGAGATTAAGAAGCTCTTGAAATCACTTATGGTTTGTTCTAGCGAGGGCAAAGAGTGTGACTTGGGTTTTGAGCTTACTACTTTGACCAACGGTATCCTATGTAGGACGGCTATGAGCACTACATGTCTAGACAAAGATAAGAATAGTGATGATGATGCTAATGAGATTCGTGGATTGGTTAAGGAGCTTATGCAACTTGCTGGTAAATTGAGCATTGGCGAGGTTCTTGGGCCTTTGGGTAAGCTGGATTTATTTGGGTATGGGAGAAGGCTTTTGAAAATACTCAACAGATTTGACCAGATCTTGGAGCGGATCATGGAGGAACATGAGAACAATAAAAACAAATGTGATGATCATGAAGAAGAAACACGGGACATGATGGACGTTTTGTTGCAAGTTTATAGAGATCCAAATGCTCAAGAGAGATTAACAAGGAATCACATCAAGGGCTTCTTCCTAGATATTTTCCTTGCGGGAACAGAAACTACTTCAGTGGCATTGCTTTGGACCATGGCAGAGATCTTAAACCACCCAAGTGATGTGCTCAAGAGGTTGAGGGCAGAGATTGAAGCAGTGGTGGGGTCAACAAGGCTGGTCAACGAATCGGACGTTCCAAAACTCCCTTACCTGCAGGCTGTTGTAAAGGAAGCTCTAAGGCTCCATCCACCGGCACCGATTGTTCCCAGGGAAGCTGCAGAAGATTGCATGATCAACGGCTACAATTTAAAGAGGCAAACAAGAACAATTATCAACGCCTACGCCATTATGCGGGACCCGGAAGCATGGGCCAACCCGGAAGAGTTCATACCAGAGAGATTCTTGGAAGGTAGCAGTCTGATTAAAATGAGTGTTAATGATGTAAAATATGTTCCGTTTGGGTTCGGTAAGAGAGGGTGCCCTGGAGCTTCTCTTGCTTTGACGGTCATAAATGTGACGGTTGCTTCGTTGATTCAATGTTTTGATTGGAGAATAAAGGGTGGAGATAAGGTTAATACGGAAGAAAGCTCCGCTTTTTCTACAGGATTGGCACAACCACTTCTTTGTTACCCTCTTACTTGTTTCAATCCCTTCTCTCTCTCGCCTTGA 1557 0.4335 MAANNSVLLYILSSLGLVVFTSLLKYLIGKTSSTNRIKTPPCPPSLPIIGHLHLIGSVIPKSFHALAKLHGPLIQLRLGASTCVLVSNVQVAKQVLKTNEINFVNRPHFGSSEYYLYKGFGFVMEPYGPYWRFMKKLCMTQLLSSSQLGRFMHIREQEIKKLLKSLMVCSSEGKECDLGFELTTLTNGILCRTAMSTTCLDKDKNSDDDANEIRGLVKELMQLAGKLSIGEVLGPLGKLDLFGYGRRLLKILNRFDQILERIMEEHENNKNKCDDHEEETRDMMDVLLQVYRDPNAQERLTRNHIKGFFLDIFLAGTETTSVALLWTMAEILNHPSDVLKRLRAEIEAVVGSTRLVNESDVPKLPYLQAVVKEALRLHPPAPIVPREAAEDCMINGYNLKRQTRTIINAYAIMRDPEAWANPEEFIPERFLEGSSLIKMSVNDVKYVPFGFGKRGCPGASLALTVINVTVASLIQCFDWRIKGGDKVNTEESSAFSTGLAQPLLCYPLTCFNPFSLSP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00011 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 21 496 - -
Stsc60417g00011 518 Pfam Cytochrome P450 40 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Stsc60417g00011 518 Coils Coil 259 279 - -
Stsc60417g00011 518 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 Gene3D Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 SUPERFAMILY Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00011 518 CDD CYP93 71 507 - -
Stsc60417g00011 518 FunFam Cytochrome P450 family protein 31 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00011 Stsc-Chr60417 55194 57070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00011 5 514 Cytochrome P450 AT2G42250 48.549 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00011 - - gmx:106794180 688.337