Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00010 ATGAGCACTACATGTTTGGATAAAGATAAGAATAATGATGATGATGCTAATGAGATTCATGGATTGGTTAAGGAGTTTATGGAACTTGCTGGTAAATTGAGCATTGGCGAGGTTCTTGGGCCTTTGGGTAAATTGGATTTATTTGGGTATGGGAAAAAGCTTTTGAAAACACTCAGCAGATTTGACCAGATCTTGGAGAGGATCATGGAGGAACATGAGAAGAAGAAGAACAACAAATGTGATGATCATGAAGGAGAAACATGGGACATGATGGACGTTTTGTTACAAGTTTATAGAGATCCAAATGCTCAAGAGAGATTAACAAGGACTCACATCAAGGGCTTCTTCCTAGATATTTTCCTAGCGGGAACAGACACCACTTCAGTGGCATTGCATTGGACCATGTCAGAGATCTTAAACCACCCAAGTGTGTTCAAGAGGTTGAGGGCAGAGATTGAAGCAGTGGTGGGGTCAACAACGCTGGTCAACGAATCTGACGTTCCAAAACTGCCTTACCTCCAGGCTGTTGTAAAGGAAGCTCTAAGGCTCCATCCATCGGCACCGTTGGTTCTGAGAGAAGCTGCAGAAGATTGCATGATCAACGGCTACAATTTAAAGAGGCAAACAAGAACAATTATCAACGTGTACGCCGTTATGCGGGACCCAGAAGCATGGGCCAACCCGGAAGAGTTCATACCAGAGAGATTCTGGGAAGGTAACAGTCTGATTAAAATGAGTGTTAATGATGTAAAATATGTTCCGTTTGGGTTCGGTAAAAGAGGGTGCCCTGGAGCTTCTCTTGCTTTAACAGTCATAAATGTGACGGTTGCTTCGTTGATTCAATGTTTTGATTGGAGAATAAAGGATGGAGATAATAAGGTTAATATGGAAGAAGGGTCCTCTTTTTCTACAGGATTGAAACAACCACTTCTTTGTTACCCTCTTACATGTTTTAATCCCTTTTCTCTCTCGCCTTGA 978 0.4213 MSTTCLDKDKNNDDDANEIHGLVKEFMELAGKLSIGEVLGPLGKLDLFGYGKKLLKTLSRFDQILERIMEEHEKKKNNKCDDHEGETWDMMDVLLQVYRDPNAQERLTRTHIKGFFLDIFLAGTDTTSVALHWTMSEILNHPSVFKRLRAEIEAVVGSTTLVNESDVPKLPYLQAVVKEALRLHPSAPLVLREAAEDCMINGYNLKRQTRTIINVYAVMRDPEAWANPEEFIPERFWEGNSLIKMSVNDVKYVPFGFGKRGCPGASLALTVINVTVASLIQCFDWRIKDGDNKVNMEEGSSFSTGLKQPLLCYPLTCFNPFSLSP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00010 325 SUPERFAMILY Cytochrome P450 8 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 Pfam Cytochrome P450 13 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 Gene3D Cytochrome P450 1 308 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS E-class P450 group I signature 262 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS E-class P450 group I signature 252 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS E-class P450 group I signature 131 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS E-class P450 group I signature 111 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS E-class P450 group I signature 214 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS P450 superfamily signature 122 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS P450 superfamily signature 262 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS P450 superfamily signature 253 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00010 325 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 304 - -
Stsc60417g00010 325 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 255 264 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00010 Stsc-Chr60417 51523 52752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00010 1 321 Cytochrome P450 AT2G42250 50.153 1.31e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00010 - - lja:Lj1g3v4303210.1 421.009