Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60417g00009 ATGATCAAAATAATAAGAACCTCAAATTCCAGCAGCGGCAAGAAGAAGCTACCATCTCCACCATCACTACCAATAATTGGACACCTTCATCTTGTAGGGTCAGTGATACCAAAGTCATTTGAATCCTTGGCAAAACTCTATGGCCCTTTGATTCAACTTCGTTTAGGTGCCTCAACTTGCATACTTGTTTCCAATGCCCAAGTTGCAAGAGAAGTAATGAAAACACATGAGCTCAACTTTTGTTACCGCCCCAACTTCGGTTCCTCTGAGTATTTTCTTTACAAAGGCTCTTATTTCATTACAGCACCATATGGCCCTTATTGGAGGTTCATGAAGAAGCTATGTGTCACTCAGCTTCTCTCTAGTTCTCAGCTTGGGAGATTCATGCACATAAGGGAGCAAGAGATTAAGAAGCTCTTGAAATCACTCATGGTTTGTTCTGAAGAGGGCAGAGAGTGTGACTTGGGTTTTGAGCTTACTACTTTGACCAACAATATCTTATGTCGGATGGCCATGAGCACCACTTGTTTTGAGAATGATGATGCTGAGGAGATTCATGGTTTTGTTAAGGAGTTTTTAGAAGTTGGTGCTAAGTTGAGCATTGGTGAGGTATTTGGGCCTTTGGGGAAGCTTGATTTGTTTGGGTATGGGAAGAAGCTTGGGAAAATAGTGGGGAAATTTGACTGCATCTTGGAGAGGATCATGGAGGAACATGAACATGGAGATGGTTGTGATGATGAGGAAGAAACCACCATGGACATGATGGATATTCTGTTGAGAGTTTATAGAGATCCAAATGCTCAGGTCAGGTTGACAAGGAATGACATCAAGGCCTTCTTCCTAGATATATTTCTTGCGGGAACAGACACCTCTTCAGTGGCATTGCAATGGAGCATGGCAGAGATACTCAACCACCCAACAATACTGAAGAAGCTAAAGGCAGAGATTGATGGTGTGGTTGGGTCAACGAGGTTGGTCAACGAATCGGACGTTCCAAATCTGCCTTACCTCCAAGCGGTTGTGAAGGAAGTGCTAAGGCTCCATCCAACGGCACCATTTGCTCTTAGACAATCTGCTGAAGACTGCATCATCAATGGTTTTCATGTTAAGGCTCAAACAAGAACACTCGTCAATGTCTATGCCATCATGAGAGACCCTCAATCTTGGCACAATCCTCAAGATTTTATCCCCGAAAGGTTCTTGGATGCTGACCAAGCTAATGATGACACTATCAAAACGAGTGTCAATGATTTTAGGTACATTCCGTTTGGGTTTGGGAGGAGAGGATGCCCCGGATCTAGTCTTGCTCTAACGGTAATACAAGCAACAATTGCAGCGTTGATACAATGTTTTGAGTGGAAAATCAAAGGGGGAGATAAGGTTAACATGGAAGAAGGCTCATCATTCTCTGCAGGCTTGGCTAAGCCACTACTTTGTTACCCTATCATATCTTATAATCCCTTTTCACACCGTGAGGTGTGA 1482 0.4325 MIKIIRTSNSSSGKKKLPSPPSLPIIGHLHLVGSVIPKSFESLAKLYGPLIQLRLGASTCILVSNAQVAREVMKTHELNFCYRPNFGSSEYFLYKGSYFITAPYGPYWRFMKKLCVTQLLSSSQLGRFMHIREQEIKKLLKSLMVCSEEGRECDLGFELTTLTNNILCRMAMSTTCFENDDAEEIHGFVKEFLEVGAKLSIGEVFGPLGKLDLFGYGKKLGKIVGKFDCILERIMEEHEHGDGCDDEEETTMDMMDILLRVYRDPNAQVRLTRNDIKAFFLDIFLAGTDTSSVALQWSMAEILNHPTILKKLKAEIDGVVGSTRLVNESDVPNLPYLQAVVKEVLRLHPTAPFALRQSAEDCIINGFHVKAQTRTLVNVYAIMRDPQSWHNPQDFIPERFLDADQANDDTIKTSVNDFRYIPFGFGRRGCPGSSLALTVIQATIAALIQCFEWKIKGGDKVNMEEGSSFSAGLAKPLLCYPIISYNPFSHREV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60417g00009 493 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 162 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 68 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 44 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 470 - -
Stsc60417g00009 493 SUPERFAMILY Cytochrome P450 13 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 Pfam Cytochrome P450 18 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Stsc60417g00009 493 Gene3D Cytochrome P450 2 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60417g00009 493 FunFam Cytochrome P450 family protein 8 479 - -
Stsc60417g00009 493 CDD CYP93 48 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60417g00009 Stsc-Chr60417 48185 50434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60417g00009 1 488 Cytochrome P450 AT2G42250 52.846 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60417g00009 - - gmx:106794180 696.041