Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc60416g00106 | ATGGATGATTACCGGACATTGGATGACCATGATCAGTATGAGTCGGCTGGACTGGATGATTCGTTGGAGGATCCTAGGGATTTTGATCGGGTAATGCAAGATCGAAGGGCTGCAGAGATGGAACTAGATGCTCGTGATGGTCGCGTTACCAATCGCAAATTCCCTCAGCTTCTCCATGACCAGGATACAGATGATGACAGTTACAGACCTTCTAAAAGGGCTCGAGCTGATTTCAGGGGTCCTAATCTGAGCGATGATGATGTCGACGGAATGCAGACATCACCTGGAAGGTCACAGCCAGGACATTCTAGAGATGATGTTCCGAGGGCTGATCAAACTGAGGATGATCCATATGAGGATGAATTTGATGAGGAAGGTGGCTATGAGATGTACCGAGTTCAAGGAACACTTAGAGAATGGGTTACAAGAGATGAAGTGCGCCGCTTCATAGCTAGAAAATTCAAGGATTTCTTGCTCACCTATGTTAATCCTAAAAATGAACACGGTGACTTTGAATATGTGCGGCTGATAAATGAAATGGTGTTAGCCAATAAGTGCAGTTTGGAGATAGATTACAAGCAATTTATCTATGTTCATCCCAACATCGCCATTTGGCTGGCTGATGCGCCTCAATCTGTCTTGGAAGTAATGGAAGATGTTGCTAAAAATAATTCCTATTCAGAGGTGAAAGTTGGATCCTGTCCTGAGTGTCAATCAAAAGGGCCATTTACTGTCAATATTGAGCAGACAATTTACAGGAATTTTCAAAAGCTCACTCTCCAAGAGAGCCCAGGAATCGTTCCTGCAGGTCGATTACCAAGATACAAGGAAGTTATATTATTGAACGATCTGATTGACTGTGCCCGCCCTGGGGAAGAGATTGAGGTCACAGGTATCTATACTAATAACTTCGATTTGTCCCTAAACACAAAGAATGGCTTTCCTGTGTTTGCCACTGTTGTCGAAGCAAATTATGTCACAAAGAAGCACGACCTGTTCTCTGCTTACAAACTTACTCAGGAAGACAAAGAAGAGATTGAGAACTTGAGCAAAGATCCAAGAATAGGAGAAAGGATTATCAAGTCTATTGCTCCATCAATCTATGGCCATGAGGACATCAAAACTGCAATAGCTTTAGCTATGTTTGGAGGTCAAGAAAAAAATGTTGAAGGAAAGCATAGACTGAGAGGAGATATTAATGTTCTACTTCTTGGTGATCCAGGAACAGCGAAGTCACAATTTCTCAAGTACGTTGAGAAAACTGGGCAACGTGCTGTATACACTACTGGCAAGGGGGCGTCTGCTGTTGGTCTCACTGCTGCAGTTCACAAGGATCCTGTAACAAGGGAATGGACCTTGGAAGGAGGAGCCCTTGTCCTAGCTGACAAAGGGATCTGCCTTATTGATGAGTTTGACAAGATGAATGACCAAGACAGGGTAAGTATCCATGAAGCCATGGAGCAGCAGAGTATAAGCATATCAAAAGCGGGAATTGTTACATCTCTTCAGGCACGCTGCTCTGTCATTGCTGCCGCCAATCCTATTGGAGGAAGATATGATTCCTCCAAAACATTTTCTCAAAATGTTGAATTGACAGACCCCATTATTTCCCGTTTTGACATCCTCTGTGTTGTGAAGGATGTGGTCGATCCGGTCACTGATGAAATGCTAGCAAAGTTTGTAGTGGACAGTCACTCTAAGTCACAACCAAAGGGTGGTAATAGAGATGACAAGTCCGTGACAGAGTCCCAAGATGATTATGCATCTGGCGTGCCTGTTGATCCCGAGATACTTCCACAAGAGTTGCTAAAGAAGTATATTACTTATGCTAAATTAAATGTGTTCCCAAGACTACATGATGCTGATTTGGATAAACTGACACATGTTTACGCAGAACTGCGGAAAGAATCCTCGCACGGTCAAGGGGTCCCTATAGCTGTAAGGCATATTGAGTCAATGATAAGGATGTCTGAAGCTCATGCGAGGATGCATCTCAGGCAGCATGTCACACAAGAGGATGTGGACATGGCAATTCGAGTCCTACTTGATTCATTCATTTCAACCCAGAAATTTGGAGTGCAGAAAGCTCTTCAAAAGAGCTTTAGAAAATACATGACTTTCAAGAAGGACTACAATGAATTGCTGCTTTACCTTCTCCGCGAGCTTGTCAAGAATGCTTTGCGTTTTGAAGAAATTGTTACGGGATCTACTTCAGGTCTTGAACATATAGATGTCAAAGTAGATGATCTCCAGAATAAGGCTCAAGAGCATGAAATTTATGATCTTAAACCATTCTTCAACAGTAGTCACTTTTCAAGGGCCAATTTTGTATTGGATGAAGAGCATGGAGTCATCAGACATCGCCTTGCTAACTGA | 2376 | 0.4293 | MDDYRTLDDHDQYESAGLDDSLEDPRDFDRVMQDRRAAEMELDARDGRVTNRKFPQLLHDQDTDDDSYRPSKRARADFRGPNLSDDDVDGMQTSPGRSQPGHSRDDVPRADQTEDDPYEDEFDEEGGYEMYRVQGTLREWVTRDEVRRFIARKFKDFLLTYVNPKNEHGDFEYVRLINEMVLANKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVAKNNSYSEVKVGSCPECQSKGPFTVNIEQTIYRNFQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFATVVEANYVTKKHDLFSAYKLTQEDKEEIENLSKDPRIGERIIKSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADKGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFSQNVELTDPIISRFDILCVVKDVVDPVTDEMLAKFVVDSHSKSQPKGGNRDDKSVTESQDDYASGVPVDPEILPQELLKKYITYAKLNVFPRLHDADLDKLTHVYAELRKESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNELLLYLLRELVKNALRFEEIVTGSTSGLEHIDVKVDDLQNKAQEHEIYDLKPFFNSSHFSRANFVLDEEHGVIRHRLAN | 791 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc60416g00106 | 791 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
| Stsc60416g00106 | 791 | Pfam | MCM N-terminal domain | 152 | 224 | IPR027925 | - | |
| Stsc60416g00106 | 791 | Pfam | MCM OB domain | 233 | 302 | IPR033762 | - | |
| Stsc60416g00106 | 791 | CDD | MCM2 | 358 | 684 | - | - | |
| Stsc60416g00106 | 791 | MobiDBLite | consensus disorder prediction | 1 | 125 | - | - | |
| Stsc60416g00106 | 791 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 224 | 731 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Stsc60416g00106 | 791 | Pfam | Mini-chromosome maintenance protein 2 | 1 | 123 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
| Stsc60416g00106 | 791 | SUPERFAMILY | Nucleic acid-binding proteins | 153 | 324 | IPR012340 | - | |
| Stsc60416g00106 | 791 | SMART | mcm | 206 | 686 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Stsc60416g00106 | 791 | Gene3D | - | 335 | 708 | IPR027417 | - |
Showing 1 to 10 of 28 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc60416g00106 | K02540 | - | pop:18094485 | 1138.25 |
Showing 1 to 1 of 1 entries