LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60416g00092	ATGAGGTTCTTAATCTTAATCTTAGTCATAATTACAACTGCAAGAACTGAAGAACCAGCTTCCAAATCCTTCTTAATCTCATGCGGTTCTTCCACCGGTGGAACAGATTCTAACGGAAGAAAATGGTTGCCAGATTCCAAGTACCTAACAGCACCTTCTTCCATTGATACAAAGAGTTCAATAGCAAAAGAACAAGACCCTTCTATTCCTTCACAAACACCATACATGTCCGCAAGGATCTTCACTTCTTCTTCTTCTCCTTCAACTTACCAGTTCCCTGTTTCACCAAACACACGCCACTATATTCGATTCCACTTTTACCCTTCCACCTACGATTCTTCTCTTGATCCAAACAACGCATACTTCTCCGTTCACGCGAATGGCTTCACTCTGCTCAACAACTTCAGTGCCTCCCTCACAGCAAAATCTCTCGCACAAGCTTACTTCATCAAGGAATATTCTCTCGTCCCTGCAGAATCAGGTAAACTCAGCATCACCTTCACACCGTGTTCCAAACGCCATGGATCATACAGTTTCATCAATGGCATTGAAGTTATCACTGTCCCTAACATGTTCACTCAACCACCACCTCTGGTTTCAACTCACCAATCGTTGCAAACCATGTTTCGGTTGAACGTTGGTGGACAGTACATTTCACCAGAGAGAGATTCCGGTGGTCTCAGCAGAACATGGGAGGATGATTCACGTTACCTGTTCGCCGCAGCCGTAGGTGCCACTGCTGCGGAGGATAATAATCTTACAATTCGATACGATTCTGATGTTCCAGAATACATTGCTCCTGAGAATGTTTACGCCACAGCAAGAACAATGGGTCCTACTAATGCAGTGAATCAGAATTTTAACCTCAGTTGGGTTTTTCAGGTTGATGCAAATTTCACCTACATTGTGAGGCTCCATTTTTGTGAGCTCTTTTTCACCAAAATTAACCAGAGAGTGTTTAACATTTACGTTAACAACCAAACTGCACTAGAGGGTGCTGATGTTTATGGGTGGACTAAATCCAAAGGTGTTCCTATTTATCAAGATTTTGCCATTTTTGTTATGGATGTAGCTGGTGTTGATGATCAAGAATTGTGGGTGGAATTGCATCCGGATAAGAAAACAAAGCCACAGTATTTCGATGCAATTCTTAATGGGTTGGAGATATTCAAGATCAGTGACAGCAATGGGAACTTGGCTGGGCCTAATCCTACTCCATCAAATATGCTTCTTGATTCAGAATCAGAATCAGAAGCTAAGAAAGGTAACAAAAAACATAGTAATCTAGCTGCAGTTATTTCTGCTGGAATGATTATTCTTCTTGTTGTAGCTTTATGCTTAGTTTTTGACCTTAGAAAGAAGAGCATAGCTGATAGATATGGAATTGTTCTTGGTAATTGGCTGGCCACACATGAATCGCTAAACACATCAACTGAATATGGCCGTCATAAGAGTACTGGTGCTGGTTGTAGTATTTCAACACAAGGCTTATTATGCCAAAACTTTTCAATGGAGGAGATTAAACTCGCTACAAAGAACTTTGATGAATCACAGGTTATTGGTGTTGGTGGATTTGGGAAGGTTTACAAGGGTGTCATACAAGGAACTAAAGAAGTTGCTGTGAAAAGATCTAATCCATCTTCAAATCAAGGAATAGACGAGTTTCAGAATGAAATTTACATGCTTTCAAAGCTTAGGCACAGGCATTTAGTCTCTCTAATTGGATTTTGCCAAGAAGATGGCGAAATGATTCTGGTTTATGATTACATGGCCAATGGAACTCTTCAGCAGCATCTCTACAAGAGTAACAAGCCATCTTTGCCATGGAATCAAAGGCTTGAAATATGTATCGGAGCCGCGAGAGGGCTTCATTACCTTCACACCGGTGCTAAGTTCACCATCATTCACCGTGATGTGAAAACATCAAATATCCTATTAGATGAAAGTTGGGTAGCAAAAGTATCTGATTTTGGTTTATCCAAAACTGGTCCAAACATGAATCAAACCCATGTCAGCACAATGGTGAAAGGCAGTTTTGGTTACTTTGATCCTGAATACTTTCGCAGGCAACAACTAACAGAGAAATCTGATGTTTACTCTTTTGGGGTGGTTCTGTTTGAGGTGTTATGTGCAAGGCCAGCACTTGATCCTAGATTGCCAAAAGAGCAAGTTAGTTTAGCTGATTGGGCTTTGATGAACCTAGAGAAAGGTTCACTTGAAGATATCATTGATCCTCATCTTCAAGGGGAGATTAGCTTTGATTGTTTGAAGAAGTTTGGTGAGATTGCTAACAAGTGTTTAGCTGATAATGGACTTGAACGTCCTTCAATGGGTGATGTGCTGTGGACACTTGAGCTTGCACTTCAGCTGCAGAAGAAGAAGAATCCTGATGCAGGAAAACTTGAAGGAAAGGAAATAGAGAAGGCAAATGATGACTCTAGCAGGGTGTTTGATGACTCAAGTTCTAACGCAGCCTTTTCACTAATTGCTATGCCAACAGGAAGATAA	2508	0.4099	MRFLILILVIITTARTEEPASKSFLISCGSSTGGTDSNGRKWLPDSKYLTAPSSIDTKSSIAKEQDPSIPSQTPYMSARIFTSSSSPSTYQFPVSPNTRHYIRFHFYPSTYDSSLDPNNAYFSVHANGFTLLNNFSASLTAKSLAQAYFIKEYSLVPAESGKLSITFTPCSKRHGSYSFINGIEVITVPNMFTQPPPLVSTHQSLQTMFRLNVGGQYISPERDSGGLSRTWEDDSRYLFAAAVGATAAEDNNLTIRYDSDVPEYIAPENVYATARTMGPTNAVNQNFNLSWVFQVDANFTYIVRLHFCELFFTKINQRVFNIYVNNQTALEGADVYGWTKSKGVPIYQDFAIFVMDVAGVDDQELWVELHPDKKTKPQYFDAILNGLEIFKISDSNGNLAGPNPTPSNMLLDSESESEAKKGNKKHSNLAAVISAGMIILLVVALCLVFDLRKKSIADRYGIVLGNWLATHESLNTSTEYGRHKSTGAGCSISTQGLLCQNFSMEEIKLATKNFDESQVIGVGGFGKVYKGVIQGTKEVAVKRSNPSSNQGIDEFQNEIYMLSKLRHRHLVSLIGFCQEDGEMILVYDYMANGTLQQHLYKSNKPSLPWNQRLEICIGAARGLHYLHTGAKFTIIHRDVKTSNILLDESWVAKVSDFGLSKTGPNMNQTHVSTMVKGSFGYFDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALDPRLPKEQVSLADWALMNLEKGSLEDIIDPHLQGEISFDCLKKFGEIANKCLADNGLERPSMGDVLWTLELALQLQKKKNPDAGKLEGKEIEKANDDSSRVFDDSSSNAAFSLIAMPTGR	835

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60416g00092	835	MobiDBLite	consensus disorder prediction	797	815	-	-
	Stsc60416g00092	835	Pfam	Protein tyrosine and serine/threonine kinase	517	781	IPR001245	GO:0004672\|GO:0006468
	Stsc60416g00092	835	FunFam	Receptor-like protein kinase FERONIA	590	801	-	-
	Stsc60416g00092	835	FunFam	receptor-like protein kinase FERONIA	476	589	-	-
	Stsc60416g00092	835	Gene3D	Phosphorylase Kinase; domain 1	476	589	-	-
	Stsc60416g00092	835	SUPERFAMILY	Protein kinase-like (PK-like)	494	786	IPR011009	-
	Stsc60416g00092	835	Gene3D	-	204	393	-	-
	Stsc60416g00092	835	Gene3D	-	22	188	-	-
	Stsc60416g00092	835	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	634	646	IPR008271	GO:0004672\|GO:0006468
	Stsc60416g00092	835	PANTHER	OS03G0124300 PROTEIN-RELATED	5	455	IPR046957	GO:0004672
	Stsc60416g00092	835	ProSitePatterns	Protein kinases ATP-binding region signature.	520	542	IPR017441	GO:0005524
	Stsc60416g00092	835	Pfam	Malectin-like domain	26	392	IPR024788	-
	Stsc60416g00092	835	SMART	serkin_6	514	787	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc60416g00092	835	CDD	STKc_IRAK	520	785	-	-
	Stsc60416g00092	835	ProSiteProfiles	Protein kinase domain profile.	514	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc60416g00092	835	MobiDBLite	consensus disorder prediction	797	818	-	-
	Stsc60416g00092	835	FunFam	FERONIA receptor-like kinase	23	189	-	-
	Stsc60416g00092	835	Gene3D	Transferase(Phosphotransferase) domain 1	590	811	-	-
	Stsc60416g00092	835	FunFam	FERONIA receptor-like kinase	203	393	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60416g00092	Stsc-Chr60416	497982	500504	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60416g00092	11	834	Receptor kinase-like Gene Family	AT3G51550	51.168	0.0	830

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Stsc60416g00092		Malectin_like	6e-46	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60416g00092	-		-	vvi:100260108	994.956