Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60416g00051 ATGGGACAAGAATCAGATTCCAAAACCCAGTTGGTATTACAGATTTGCTCCATTGCCACCCGTCCTGTGGTATGTCCCCATAGGCTTCTCTCAAACTCACCCAACCCATCATCTTTCATTGACTGGTATTGCATTCTCGGTGTGGAAGAAAATGCAGGGATAAACACCATTCGCAAGAGATACCATAAGCTAGCCCTGCAACTTCATCCAGATAAGAACAAACACCCCAAGGCTGAAATTGCCTTCAAGCTTGTTTCTGAGGCCTATACATGTTTATCCAATGCTGCAAAGAGAAAAGCATTCGACTTGGACAGACTCAAGAGCTTATGCTTTGAATGCAGAAGAATCCCCAATACATCAGGAAATACCGCCGGTTCGGGGTTCAAGGCATGGAATATTATCAACATCTCAAAGTCTTTCAAGCTCTGGAGAAACATAAGAGACATGAGAGATAGATTCAAGGAAGAGGCGAAGGTGATAGAGAACTGTCTGCGAGCGAATTCGATGTCAAGGAAAGAATCTCCTCTCTATAATCCGGTTGGATACCTACAAAGAAGCAAGTCCCTGCACAGATTTGATAGAGAAACCCCTGTTTTCAATCCCTCAGATTATTTGTACCAAGGCTACCCTCATCTGAGGAGCAATGTTTACAAGAATTCTTCCACATATTGGTACTTGCAGACAGATAGTATGCTGCATAATTGA 705 0.4312 MGQESDSKTQLVLQICSIATRPVVCPHRLLSNSPNPSSFIDWYCILGVEENAGINTIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSNAAKRKAFDLDRLKSLCFECRRIPNTSGNTAGSGFKAWNIINISKSFKLWRNIRDMRDRFKEEAKVIENCLRANSMSRKESPLYNPVGYLQRSKSLHRFDRETPVFNPSDYLYQGYPHLRSNVYKNSSTYWYLQTDSMLHN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60416g00051 234 SUPERFAMILY Chaperone J-domain 35 103 IPR036869 -
Stsc60416g00051 234 Gene3D DnaJ domain 40 158 IPR036869 -
Stsc60416g00051 234 CDD DnaJ 41 94 IPR001623 -
Stsc60416g00051 234 Pfam DnaJ domain 41 102 IPR001623 -
Stsc60416g00051 234 PRINTS DnaJ domain signature 61 76 IPR001623 -
Stsc60416g00051 234 PRINTS DnaJ domain signature 77 97 IPR001623 -
Stsc60416g00051 234 PRINTS DnaJ domain signature 43 61 IPR001623 -
Stsc60416g00051 234 PANTHER BNAC03G44070D PROTEIN 21 116 - -
Stsc60416g00051 234 SMART dnaj_3 40 97 IPR001623 -
Stsc60416g00051 234 ProSiteProfiles dnaJ domain profile. 41 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60416g00051 Stsc-Chr60416 264986 266183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60416g00051 1 104 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.862 1.57e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60416g00051 - - gmx:100816858 390.193