Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc603g00005 ATGAGTTGCTCATTTAAGACTTTCAACAAACACCTCACACTCCTCTGCTTCCATAAGTGCACCACCTCTTATGGTTTCATCCCTTCAGTTTCTCACTTTCTTCCAAAGCTTCTCAGCTCGGGTTCTTCTCAGATTCTACATCACTCGGCTTATCATTCTGCTTCAGTAATGGAGGTGTTCAAAGCTGTTGCCAAGAATGAACTTGCAACTCATGGAAGTGTTGCTATCAGAGCTGACCAGAATAGTTATAGTTACAAGCAACTAATCTTGTCTGCACAGAAGATATCTAATATATTGTGTGGCAGCGACATAAAGACAGGAAACCTTGGTGGAGCTCGGATAGGAATTGTAGCTAAACCCTCTGCCGAATTTGTAGCTGGAATACTTGGGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAACCAGAGCTTTTACATGTGATTCATAATTCGGATGTGTCAACAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAGGCCTTGCCAATAAAACTTCTTCTCAGTTTTTTCATCTCCCACCTGTTCTCACTAAGTCCTCAGGGAAAAGCAGGGATGAAGATTCACAAAATGGGGAAATTGATGTTGATAGAATTTTCCAGGACAATATTGAAAAACCAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACAACAGGTAAACCTAAGGGAGTGGTTCATACTCACAGAAGCATTGCTGCTCAGGTCCAAACCTTAGCAAATGCATGGGAGTATACATCTGCTGACAAGTTTCTACACTGTCTACCATTGCATCATGTTCATGGACTTTTCAATGCTTTATTCGCCCCTCTCTATGCAGGATCCTCGGTTGAATTTATGCCAAAATTTAGTGTGAGGGGAATTTGGCAGAGATGGCGTGAGTCATATCCATCTGAAGGATCTAAGGCTGATGACGCTATAACTGTTTTCACTGGAGTTCCAACTATGTACACCCGGTTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCCACCTCAGCATCTGCTGCACGGAACTTGCGTCTTATGATGTGTGGATCCTCTGCACTCCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCGAATCCTTTGAAAGGCGAGCGTAAACCAGGCACTGTTGGCAAACCATTTCCTGGTATAGAGGTCAAGATCCTTGTAGATGAGGACAGTGGAAAAGACAAGACTAAAGTGGGGGAGCTTTGTGTTAAAAGCCCTTCATCCTTTAAAGAATATTGGAAACTTCCAGAGATAACAAAAGAATCATTTACTGAAGATGGATTTTTTAAGACTGGGGATGCAGTTACTACAGATGAAGATGGATACTACATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTACAAACTATCTGCCTTAGAAATTGAATCAGTTATACTAGAGCATCAAGCTGTCTCGGAATGCTGCGTTTTGGGCTTACCCGATAAAGATTATGGGGAAGTTGTCGGTGCAATTATCGTACCAGAGGCTGATGTCAAGAGAAAGCGAGATGAAGAGTCAAAGCCTGTTCTAAGCCTGGAAGAGTTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATACCAACTAAACTTTTCGTTTGGGACTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAAATTTTGGCTTCAGAACAGTAG 1800 0.4261 MSCSFKTFNKHLTLLCFHKCTTSYGFIPSVSHFLPKLLSSGSSQILHHSAYHSASVMEVFKAVAKNELATHGSVAIRADQNSYSYKQLILSAQKISNILCGSDIKTGNLGGARIGIVAKPSAEFVAGILGTWFSGGVAVPLALSYPEPELLHVIHNSDVSTILSTEDHSELMQGLANKTSSQFFHLPPVLTKSSGKSRDEDSQNGEIDVDRIFQDNIEKPSEDPALILYTSGTTGKPKGVVHTHRSIAAQVQTLANAWEYTSADKFLHCLPLHHVHGLFNALFAPLYAGSSVEFMPKFSVRGIWQRWRESYPSEGSKADDAITVFTGVPTMYTRLIQGYHAMDPELQATSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIEVKILVDEDSGKDKTKVGELCVKSPSSFKEYWKLPEITKESFTEDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVILEHQAVSECCVLGLPDKDYGEVVGAIIVPEADVKRKRDEESKPVLSLEELSTWAKDKIAPYKIPTKLFVWDSLPRNAMGKVNKKELKKILASEQ 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc603g00005 599 PANTHER ACYL-COA SYNTHETASE 61 595 - -
Stsc603g00005 599 Pfam AMP-binding enzyme C-terminal domain 500 585 IPR025110 -
Stsc603g00005 599 Gene3D - 486 599 IPR045851 -
Stsc603g00005 599 Pfam AMP-binding enzyme 70 489 IPR000873 -
Stsc603g00005 599 SUPERFAMILY Acetyl-CoA synthetase-like 58 597 - -
Stsc603g00005 599 FunFam Acyl-CoA synthetase family member 3 65 483 - -
Stsc603g00005 599 Gene3D - 60 483 IPR042099 -
Stsc603g00005 599 CDD MCS 73 593 - -
Stsc603g00005 599 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc603g00005 Stsc-Chr603 7474 13900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc603g00005 222 597 Monolignol Biosynthesis Gene Families AT4G19010 29.049 9.07e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc603g00005 K18660 - gmx:100813324 950.658