Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc5g00039 ATGGATTCTCTTCCATACGTAGTAGAGGACTGCATGGGCTTCCTCCAGCTCTACAGCGACGGTTCCGTGTTTCGATCAAACGACATCAAATTCCATGAAACTCCGATCCAAGACGACACCGTTTCATTCAAGGACTGTCTTTACCACAAAAAGTTCAACCTCTTCCTTCGCCTCTACAAGCCCCAATCCAACAACAACAATTCCAAGCTCCCTGTGGTGATCTTCCTCCGTGGTGGAGGCTTCTGTTTCGGATCACGCACGTGGCCGCACGTGCACAACTGCTGCATGCGCCTCGCATCGGGGCTCAAGGCGGTGGTGGTTACGCCCGACTACAGGCTGGCGCCGGAGCACAGGCTCCCTGCGGCGGTGGAGGACGCCGTGGAGGCGGTGAGGTGGCTGCAGAGGCAGGTGCTGAGTGTTTGTGGCGATGCATGGTTGAGTAACGGTGACGTTGACTTTGACCGTGTTTTCATAGTGGGTGACTCGAGTGGCGGGAACATTGCGCACCACCTGGCGGTTTGGTTCGGATCCGGTTCGAGGGAGATGGAACCGGTTCGGGTACGAGGTTACGTGCTGTTGGCGCCGTTTTTTGGCGGGGTGGTTCGGACCAAGTCCGAGGAGGGTCCATCGGAGCACATGCTCACTCTTGACTTACTTGACAGATTTTGGAGGCTTTCGCTGCCTGTTGGAGAGAGCAGAGACCATCCATTTGCTAATCCATTTGGAGAAGATGCTGCAAATAATAATTATAATAATAATAATAATCTTGGAGAAGCGAAGCTTGAGCCTATGCTAGTTATGGTTGGTGGTAATGAATTGCTTAAGGATAGAGCACAAGATTATGCAAACAAGTTAAAAGAATTAGGAAAGGATATTGAATATGTTGAATTTGAAGGGTGTCAACATGGTTTCTTCACTCATGATTCATACTCCCTTGTTGCAAATGAAGTCATCCAAATCCTTACAACATTCATGCTTCAAACTTAA 987 0.4975 MDSLPYVVEDCMGFLQLYSDGSVFRSNDIKFHETPIQDDTVSFKDCLYHKKFNLFLRLYKPQSNNNNSKLPVVIFLRGGGFCFGSRTWPHVHNCCMRLASGLKAVVVTPDYRLAPEHRLPAAVEDAVEAVRWLQRQVLSVCGDAWLSNGDVDFDRVFIVGDSSGGNIAHHLAVWFGSGSREMEPVRVRGYVLLAPFFGGVVRTKSEEGPSEHMLTLDLLDRFWRLSLPVGESRDHPFANPFGEDAANNNYNNNNNLGEAKLEPMLVMVGGNELLKDRAQDYANKLKELGKDIEYVEFEGCQHGFFTHDSYSLVANEVIQILTTFMLQT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc5g00039 328 Coils Coil 271 291 - -
Stsc5g00039 328 Pfam alpha/beta hydrolase fold 73 305 IPR013094 GO:0016787
Stsc5g00039 328 PANTHER ARYLACETAMIDE DEACETYLASE 11 305 - -
Stsc5g00039 328 Gene3D alpha/beta hydrolase 15 328 IPR029058 -
Stsc5g00039 328 SUPERFAMILY alpha/beta-Hydrolases 3 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc5g00039 Stsc-Chr5 239944 245133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc5g00039 7 321 Carbohydrate Esterase AT5G16080 33.742 2.42e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc5g00039 - - gmx:100783849 499.975