Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc598g00005 | ATGTGTGGAGGTGCTATCATCTCAGACTTCATTGGCGTCAAGCGTGGTCGGAAATTGCTCTCTCAGGAGCTATGGGCTGAGCTTGATCCTTTCGCCGACTTCCTTTCTTTTGACGCCGCCATACCCAACAACAAGGATCACCCACCACCACCACCACTTTCTCAAATCCCTCATAACAACAGCAAAGTGGTAGCATGTGACAAGGTACTAGGAAAGGAAAAAACGGTTGTTGATGATGGTGCGGAAGATAACAACAAGAAGGGTCATGCATCATCCAAGAAGGTTCCAAATCAGCGTCAGAGGGTTCGTAAGAACGTGTACAGGGGAATCAGGCAGAGGCCATGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGGATCCGTGTCTGGCTCGGCACGTTTAATACGGCTGAGGAGGCCGCTAGGGCCTACGACGATGCTGCCAAACGCATCCGAGGAAAGAAAGCCAAGCTTAACTTCCCGGATGAGGGCAACGTCGTCGTAGCCCCTCCAGCGGCCAAGAAGCAGTGCCTTGGCAATGATATGCTGTGTCAAGCTGAGACTGATCCTTCTCTCGTGTTAACACCTATCTCTGCCATGCAAACTGGCAGTGATGATGGGAGCACAGAGGGATCAGTATCAGAATCTAACCTGACACAGCAGATCTCGGATCTTGAATGGTTCCTCGGACTAGAGAACGAGCAACCGTCGCAAATAATGGGTGGTGATGTCATTTGGAACAACATTAACAACAATGATAACAACAACAATAACATGGACCTGTGGATGCTGGACGACGTCGTTATGCCCAACCGTTACATGGTGTAA | 834 | 0.5048 | MCGGAIISDFIGVKRGRKLLSQELWAELDPFADFLSFDAAIPNNKDHPPPPPLSQIPHNNSKVVACDKVLGKEKTVVDDGAEDNNKKGHASSKKVPNQRQRVRKNVYRGIRQRPWGKWAAEIRDPHKGIRVWLGTFNTAEEAARAYDDAAKRIRGKKAKLNFPDEGNVVVAPPAAKKQCLGNDMLCQAETDPSLVLTPISAMQTGSDDGSTEGSVSESNLTQQISDLEWFLGLENEQPSQIMGGDVIWNNINNNDNNNNNMDLWMLDDVVMPNRYMV | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc598g00005 | 277 | ProSiteProfiles | AP2/ERF domain profile. | 106 | 163 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc598g00005 | 277 | PANTHER | DNA-BINDING DOMAIN | 88 | 206 | IPR044808 | GO:0003700|GO:0009873 | |
Stsc598g00005 | 277 | CDD | AP2 | 107 | 164 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc598g00005 | 277 | Pfam | AP2 domain | 106 | 155 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc598g00005 | 277 | FunFam | Ethylene-responsive transcription factor 2 | 105 | 164 | - | - | |
Stsc598g00005 | 277 | MobiDBLite | consensus disorder prediction | 76 | 103 | - | - | |
Stsc598g00005 | 277 | SUPERFAMILY | DNA-binding domain | 106 | 164 | IPR016177 | GO:0003677 | |
Stsc598g00005 | 277 | PRINTS | Ethylene responsive element binding protein signature | 129 | 145 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc598g00005 | 277 | PRINTS | Ethylene responsive element binding protein signature | 107 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc598g00005 | 277 | SMART | rav1_2 | 106 | 169 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc598g00005 | 277 | Gene3D | AP2/ERF domain | 106 | 164 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc598g00005 | 277 | MobiDBLite | consensus disorder prediction | 76 | 90 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc598g00005 | Stsc-Chr598 | 23705 | 25980 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc598g00005 | 1 | 270 | AP2-EREBP Transcription Factor Family | AT3G16770 | 41.497 | 2.53e-56 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Stsc598g00005 | AP2 | 2.3e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc598g00005 | K09286 | - | gmx:100817253 | 236.884 |