Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc598g00004 | ATGGCGACTGAGCAGTTAATGTCCGACGGCGGCGCACACCGTTACTTCCCTATGAAATCGGAGCAGCCTCCGTCTCCTCCGGCGGCGGCGGAGGAGATGTCGTCTGTTCCGTCTTTCCGGCATGGAGGCGCCGGCGAAGCCACTCGGATTTTCGATGAACTTCCGAAGGCCACCATCGTCTCCGTCTCTCGCCCTGATGCCAGCGACATAAGCCCTATGCAGCTCTCTTACACCATTCAGTTTCAGTACAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTTCTCAAGTATTTTATTTGCATTTTGCATTAAAGAAGCGTGCCTTTTTTGAGGAAATTCATGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAGCACACTACTATGGTGCACGATGATGATGAAGCTGATGATGAAACATTTGCATCACATGCTGATGAATATGCGAAAAACAGAGATGTTCCATCAATTGCGGCTCTACCAATTATACGACCAGCCTTAGGTAGGCAGCAGTCTGTGTCAGACAGGGCAAAGAGTGCAATGCAAGGATATTTGAATCACTTTTTGGGAAATATCAGTATTGTTAACTCTCCAGAGGGGTTGATTGTGTCGGTGGAAAAGCTTACAAATGTCTGCAGGTTTTTAGAGGTATCGAAGCTATCTTTTTTGCCTGAATATGGACCAAAACTGAAGGAAGATTATGTAATGGTGAAACATCTGCCCAAAATTCTAAAGGATGATGATTCCAGAAAGTGTTGTACTTCTAGCTGTTTTAGTTGTTGCAATGACAACTGGCAAAAGGTATGGGCTGTATTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATATCCAGCCCTTAGACATTATTGTCTTTGATGTGCTACCTCCATCCGATGGGAATGGGGATGGTCGTTTGTCACTGGCTAGTGAAATAAAGGAACGAAATCCTTTACGGCATTCATTCAAGGTGACTTGTGGGGTCCGGAGCATTAGAATTAGAGGGAAAAGTAGCAGTAAAGTTAAAGATTGGGTAGCAGCTATTAATGATGCTGGACTTAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGCTATGGGTCTTTTGCTCCCCCAAGAGGCTTGATTGAAGATGGTAGTCAAGCCCAGTGGTTCGTGGATGGCAAAGCAGCATTTGATGCAATTGCTTCTTCAATTGAGGACGCAAGATCAGAGATATTCATCTGTGGATGGTGGGTGTGCCCTGAACTGTATCTCAGGCGACCTTTTGACATTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATCTACATTCTTCTGTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTCTTAACATTCATGAGAACGTGAGGGTACTACGCTATCCTGATCACTTTTCTTCTGGTGTTTATCTGTGGTCACACCATGAAAAACTGGTCATTGTTGATAACCATATTTGCTTCATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGACTCATCTGAACATAAAGTGGGGGATTGTCCTCCTCTAATCTGGCCTGGAAAGGACTTTTATAACCCTAGGGAATCTGAACCTAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTAGAAATTATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTCGACACTTTGTTCAAAGATGGAATTATGCAAAGAGGAATAAAGCTCCATATGAGCAAGCAATACCTTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACCTGGGAAGAAGCACTGAGATGGAAATTGAAAACAATAATGCTGACAATCATAGAGTCATCAAGAGAGAAGATTCATTTTCTTCATCATCCCAAGAACAAGATGTTCCTCTACTTTTGACTCATGATGAGTCTGAAGGAGACCCTAAATTGAATGGGCTAAGCTCATTTATACATCACCTTGATAAGCCGACAAAGGTTGGTAGTGGTCTTCCTTTCTCTTTCCGGAAGGTGAAAATTGAAGCTCTTGGTCAAGACACCCCAATGAAGGACTTTGTAGATGATCTTGGATATATGCATTATGGTGAGAAAAAGTCTCTGGATAGAGTGCCTCCCGTTGAGCAACAAAATACTGGTCCAGAATGGTGGGAAACACAAGAGCGGGGTGATCAGGGAGATTTTGCAGATGAATCAGGGCAAGTTGGCCCTCGTGTTTCCTGCCGTTGTCAGGTTGTTAGGAGCGTCAGTCAATGGTCTGCTGGAACAAGTCAAACGGAAGAGAGCATACACAATGCCTATTGTTCTCTTATTGAGAAAGCCGAATACTTCATCTACATTGAGAATCAATTTTTTATTTCAGGTCTTTCTGGAGATGAAATGATTCGAAACCGTGTTCTGGAAGCTTTATATCGACGGATTATGCTAGCTTACAATGAGAATAAATCCTTTAGGGTTATCATTGTCATACCTCTCCTACCTGGCTTCCAGGGGGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCAATAATGCATTGGCAGTATCGAACCATTTGTAGAGGCCAAAATTCTATATTACATAATCTTTATGAACTTCTTGGTTCAAAAATACATGACTACATCTCCTTTTTTGGCTTGAGGTCTTATGGTAGACTTTTTGATGGTGGTCCTGTAGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGACCGCATAAGTTTGATTGGATCTGCTAATATTAATGATAGGAGCCTACTTGGATCTAGAGATTCTGAGATTGGAGTAGTTATAGAAGACAGAGAGTTAATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTCTCGTTGACTCTCCGTTTGTCACTATGGGCTGAGCACTTGGGTCTACCTTTAGGAGAGGTCAATCAAATAATGGACCCAATTATTGAATCATCTTACAAAGATATTTGGATGGCAACAGCAAAGACAAATACTGCAATTTACCAGGATGTCTTTTCTTGTGTACCTAATGATCTAATACACACCAGACTTGCTTTTCGACAGAGCGTAGCCTTTTGGAAAGAAAGAGTTGGTCACACAACCATTGATTTAGGAATAGCGCCACAGAAATTAGAATCGTATCATAATGGAGATGTGAAGAACACCGATCCATTGGAGAGATTAGCATCAGTGAGAGGTCATCTTGTTTCTTTTCCCTTGGAGTTCATGTGTCAAGAAAGTCTAAGACCTGGTTTCAGTGAAAGCGAATATTACGCTGCTCAAGTTTTCCACTGA | 3384 | 0.4249 | MATEQLMSDGGAHRYFPMKSEQPPSPPAAAEEMSSVPSFRHGGAGEATRIFDELPKATIVSVSRPDASDISPMQLSYTIQFQYKQFKWELVKKASQVFYLHFALKKRAFFEEIHEKQEQVKEWLQNLGIGEHTTMVHDDDEADDETFASHADEYAKNRDVPSIAALPIIRPALGRQQSVSDRAKSAMQGYLNHFLGNISIVNSPEGLIVSVEKLTNVCRFLEVSKLSFLPEYGPKLKEDYVMVKHLPKILKDDDSRKCCTSSCFSCCNDNWQKVWAVLKPGFLALLADPFDIQPLDIIVFDVLPPSDGNGDGRLSLASEIKERNPLRHSFKVTCGVRSIRIRGKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFVDGKAAFDAIASSIEDARSEIFICGWWVCPELYLRRPFDIHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLNIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSSEHKVGDCPPLIWPGKDFYNPRESEPNSWEDTMKDELDRRNYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSTEMEIENNNADNHRVIKREDSFSSSSQEQDVPLLLTHDESEGDPKLNGLSSFIHHLDKPTKVGSGLPFSFRKVKIEALGQDTPMKDFVDDLGYMHYGEKKSLDRVPPVEQQNTGPEWWETQERGDQGDFADESGQVGPRVSCRCQVVRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMLAYNENKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKIHDYISFFGLRSYGRLFDGGPVATSQVYVHSKIMIVDDRISLIGSANINDRSLLGSRDSEIGVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWAEHLGLPLGEVNQIMDPIIESSYKDIWMATAKTNTAIYQDVFSCVPNDLIHTRLAFRQSVAFWKERVGHTTIDLGIAPQKLESYHNGDVKNTDPLERLASVRGHLVSFPLEFMCQESLRPGFSESEYYAAQVFH | 1127 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc598g00004 | 1127 | SUPERFAMILY | Phospholipase D/nuclease | 351 | 616 | - | - | |
| Stsc598g00004 | 1127 | SMART | PH_update | 235 | 363 | IPR001849 | - | |
| Stsc598g00004 | 1127 | Gene3D | Endonuclease Chain A | 382 | 622 | - | - | |
| Stsc598g00004 | 1127 | SMART | pld_4 | 496 | 523 | IPR001736 | GO:0003824 | |
| Stsc598g00004 | 1127 | SMART | pld_4 | 924 | 951 | IPR001736 | GO:0003824 | |
| Stsc598g00004 | 1127 | FunFam | Phospholipase | 758 | 978 | - | - | |
| Stsc598g00004 | 1127 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 924 | 951 | IPR001736 | GO:0003824 | |
| Stsc598g00004 | 1127 | PANTHER | PHOSPHOLIPASE D | 207 | 1116 | IPR015679 | - | |
| Stsc598g00004 | 1127 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 496 | 523 | IPR001736 | GO:0003824 | |
| Stsc598g00004 | 1127 | PIRSF | PLD_euk | 623 | 1127 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc598g00004 | K01115 | - | gmx:100780514 | 1966.04 |
Showing 1 to 1 of 1 entries