Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc598g00002 ATGGGGTGTTTGTGGTGTTGCAACTTTGATTGGAATGTAGCAGCAGCCATGGTTCTCTTTCCATCTCTTGTCAATGGATTGGCAAGAACGATGGCATCAAAGAAAGGGAAAGGTTGTGGAAACGATGATGAGGATGAAAAGAAAGCTCTGAAAGCACTGGCAAAGGAAGCAAGGAAGAATGGATTGTTGTTGAGTTCATCTGGAACTGTTAAGTCTCCCAAGGCCAACAACTTTGCCTCTGTTTTCACAAAGAAGGGCCAGAAAGGAGTCAACCAGGATTGCCTTATTGTTTGGGAGGAATTTGGTTGGCAAGAAGACATGATATTGTGTGGAGTTTTTGATGGACATGGGCCTTGGGGACACTATGTATCCAAAAGTGTGAGGAAACTTGTTCCTGCTTCTTTGCTATGCAATTTGAAGGGAAATCTTGCTGCAACATCACTTGACCTGAATTACAAGATGGAAGCAGATGGGAGGAAGAACCACCATGATGAATTTGACATATGGAAGCAGGCATGCATAAAAACTTGTGCTGCTGTTGATCATGATCTAAAGCAGAATACTGGGATTGATTCTTTTCAAAGTGGTACTACAGCTTTGACAGTTATCAAACAG 615 0.4244 MGCLWCCNFDWNVAAAMVLFPSLVNGLARTMASKKGKGCGNDDEDEKKALKALAKEARKNGLLLSSSGTVKSPKANNFASVFTKKGQKGVNQDCLIVWEEFGWQEDMILCGVFDGHGPWGHYVSKSVRKLVPASLLCNLKGNLAATSLDLNYKMEADGRKNHHDEFDIWKQACIKTCAAVDHDLKQNTGIDSFQSGTTALTVIKQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc598g00002 205 ProSiteProfiles PPM-type phosphatase domain profile. 78 205 IPR001932 -
Stsc598g00002 205 Gene3D - 66 205 IPR036457 -
Stsc598g00002 205 SUPERFAMILY PP2C-like 72 203 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc598g00002 Stsc-Chr598 560 1774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc598g00002 20 205 PP2C-type Phosphatase Gene Family AT5G27930 53.226 5.87e-64 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc598g00002 - - aip:107636155 334.724