Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc598g00001 ATGGTTCTCTTTCCATCTCTTGTCAATGGATTGGCAAGAACGATGGCATCAAAGAAAGGGAAAGGTTGTGGAAACGATGATGAGGATGAAAAGAAAGCTCTGAAAGCACTGGCAAAGGAAGCAAGGAAGAATGGATTGTTGTTGAGTTCATCTGGAACTGTTAAGTCTCCCAAGGCCAACAACTTTGCCTCTGTTTTCACAAAGAAGGGCCAGAAAGGAGTCAACCAGGATTGCCTTATTGTTTGGGAGGAATTTGGTTGGCAAGAAGACATGATATTGTGTGGAGTTTTTGATGGACATGGGCCTTGGGGACACTATGTATCCAAAAGTGTGAGGAAACTTGTTCCTGCTTCTTTGCTATGCAATTTGAAGGGAAATCTTGCTGCAACATCACTTGACCTGAATTACAAGATGGAAGCAGATGGGAGGAAGAACCACCATGATGAATTTGACATATGGAAGCAGGCATGCATAAAAACTTGTGCTGCTGTTGATCATGATCTAAAGCAGAATACTGGGATTGATTCTTTTCAAAGTGGTACTACAGCTTTGACAGTTATCAAACAGG 568 0.4208 MVLFPSLVNGLARTMASKKGKGCGNDDEDEKKALKALAKEARKNGLLLSSSGTVKSPKANNFASVFTKKGQKGVNQDCLIVWEEFGWQEDMILCGVFDGHGPWGHYVSKSVRKLVPASLLCNLKGNLAATSLDLNYKMEADGRKNHHDEFDIWKQACIKTCAAVDHDLKQNTGIDSFQSGTTALTVIKQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc598g00001 189 ProSiteProfiles PPM-type phosphatase domain profile. 62 189 IPR001932 -
Stsc598g00001 189 SUPERFAMILY PP2C-like 56 187 IPR036457 -
Stsc598g00001 189 Gene3D - 50 189 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc598g00001 Stsc-Chr598 559 1774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc598g00001 4 189 PP2C-type Phosphatase Gene Family AT5G27930 53.226 1.14e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc598g00001 - - aip:107636155 308.145