Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc594g00001 ATGGCAAAGCAGAATAGCTGGTTTGGGTGGGTGAAGAGGTTATTCACATCTGAGTCAAACAACAAAAAACCAAAGAAATGGGGATGGGGACTTGGAAGGCTAAAGGGGAAGAAACAGTACCCAAAAATCACAGCTCCAAAAACAGCATCATTGATTGAAGTAAGTGCAGAGCAAAGAAAGCATGCTTTGACAGTGGCAATTGCAACAGCAGCTGCGGCCGAGGCCGCAATTGCTGCTGCACATGCTGCTGCCGAGGTTGTCAAGCTAACCGGTGGCTCTCGGTCTTATTCATATTTGGCCAAAGGTGATCGGAGCCTGGCCGCCATCAAGATTCAAAGCGCTTACCGGGCTCATCTGGCGAGGAAAGCATTAAGAGGACTGAAGGGAGTGACAAAACTGCAAGCTCTAATCCGTGGTCAAGCAGTGAGACGTCGAGTATCCAGCGCTTTGAAGAATTCGGCCACCAATGCAGTTAAGATCCCGGGTAAAATCAGTCACATGGAAGAAAGCTACAAAAATGGCCAGATAATTTCTATTGCAAAGCAAAAGAATAAGTTAGATGAAAATGAATTGAAGGTACAGCCAGAAGGGCAAAGTCCAATAAGTTGGGACTGTAGGTTGCACTCAAGAGAAGATATTGATGCTACATGGTTGAGAAAGCAAGAGGCTTCTGCCAAAAGAGAGCGCATGAAGCAGTATTCTTTTTCACAAAGGGAAAGAAAACTTCCCCAAATGAGTGAAGAATGTGTTCACAAGAAGGAAAATGGGAAAGAGAGAATCCGCACTTTAGGCCAATGGCTAAATAAAGAAGCAAATGACTGGAATATACACCATAAACAAGATCATCCTTCAAACTTGATCACAAAGAGAAGAGAATCACAAGCAGGACTTAGCCCACAAATCTCGATCCCCCGGAAATCATTTTCGCACACCAAAAGAAGTTCATTTGTAGCTACAGAAGGCTCCCTACCGAATTCTCCGGTCTTTCCAACTTACATGGCCGTGACAGAATCTAGCAAAGCGAAGACGAGATCTATAAGCACGCCAAGGCTAAGAACAGGGTGTTTGGACACATGTTCCTATAAAGGCGAGTCTCGGAAATAA 1104 0.4475 MAKQNSWFGWVKRLFTSESNNKKPKKWGWGLGRLKGKKQYPKITAPKTASLIEVSAEQRKHALTVAIATAAAAEAAIAAAHAAAEVVKLTGGSRSYSYLAKGDRSLAAIKIQSAYRAHLARKALRGLKGVTKLQALIRGQAVRRRVSSALKNSATNAVKIPGKISHMEESYKNGQIISIAKQKNKLDENELKVQPEGQSPISWDCRLHSREDIDATWLRKQEASAKRERMKQYSFSQRERKLPQMSEECVHKKENGKERIRTLGQWLNKEANDWNIHHKQDHPSNLITKRRESQAGLSPQISIPRKSFSHTKRSSFVATEGSLPNSPVFPTYMAVTESSKAKTRSISTPRLRTGCLDTCSYKGESRK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc594g00001 367 Gene3D - 103 155 - -
Stsc594g00001 367 Pfam Protein of unknown function (DUF4005) 310 352 IPR025064 -
Stsc594g00001 367 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Stsc594g00001 367 MobiDBLite consensus disorder prediction 228 253 - -
Stsc594g00001 367 PANTHER IQ-DOMAIN 5-RELATED 4 359 - -
Stsc594g00001 367 SMART iq_5 103 125 IPR000048 GO:0005515
Stsc594g00001 367 SMART iq_5 127 147 IPR000048 GO:0005515
Stsc594g00001 367 Pfam IQ calmodulin-binding motif 128 145 IPR000048 GO:0005515
Stsc594g00001 367 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Stsc594g00001 367 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc594g00001 Stsc-Chr594 301 3063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc594g00001 1 358 IQD Protein Family AT5G03960 42.742 3.61e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc594g00001 - - aip:107625415 540.806