Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc588g00008 ATGGGAAATGGAATCAAGGGTGGTATTAAGCCCGTGATCAATTTCAAGGGTTACTTGATTGGAAATGGTGTCACGGACAGAAACTTTGATGGCAATGCTTTTATCCCATTTGTGCATGGCATGGGCCTCATATCTGACAGTATCTACGAGGAAGTAAAAACTTCTTGCAAAGGAAATGATGACCAAAGTAATTTATGCTCAAAGAGTTACGAAAAAGTTGACAGGGCTGTTGATGATCTTAATGTGTACGACATACTAGAGCCATGCTATCATAACCCAAATACAGCTTCAAAAAGGAATTTGAGTTTGCCATCCAGTTTCAAGGAATTGGGGAAAACTGAGAAGCCACTCCCTGTGAGGAAGAGGATGTTTGGTAGGGCATGGCCACTTAGAGCAACAGTTAATGATGGCCCAGTCACATTATGGCCACAGTTGGCTGAAGATGGCCACATACCTTGTGTTAGTGATGAGATGGCTACTTCATGGCTGAACAACCAACAAGTCAGACAAGCCATTCATGCTCAACCGGAAAGTGTTTCGGGTCCATGGGAATTATGCACTAGAAGGATAAATTACAGTCACGATGCTGGAAGCATGATTCCATACCACACGAAACTAACCATCATGGGCTATAGAGCACTCATTTTCAGTGGTGACCATGATATGTGTGTGCCATTTACTGGAACTGAGGCATGGACTCGATCCCTTGGATATAAGATCATAGATGAATGGAGACCCTGGACCTCTAATGACCAAATTGCTGGATACTTGCAAGCATACAATCACAACCTCATCTTCCTCACAGTCAAGGGAGCTGGACACACAGTCCCTGAATACAAGCCACGTGAGGCACTGGATTTTTACAGCAGATGGTTGGAAGGGAAATCTATATGA 894 0.4362 MGNGIKGGIKPVINFKGYLIGNGVTDRNFDGNAFIPFVHGMGLISDSIYEEVKTSCKGNDDQSNLCSKSYEKVDRAVDDLNVYDILEPCYHNPNTASKRNLSLPSSFKELGKTEKPLPVRKRMFGRAWPLRATVNDGPVTLWPQLAEDGHIPCVSDEMATSWLNNQQVRQAIHAQPESVSGPWELCTRRINYSHDAGSMIPYHTKLTIMGYRALIFSGDHDMCVPFTGTEAWTRSLGYKIIDEWRPWTSNDQIAGYLQAYNHNLIFLTVKGAGHTVPEYKPREALDFYSRWLEGKSI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc588g00008 297 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 281 IPR001563 GO:0004185|GO:0006508
Stsc588g00008 297 Gene3D - 153 191 - -
Stsc588g00008 297 Pfam Serine carboxypeptidase 8 294 IPR001563 GO:0004185|GO:0006508
Stsc588g00008 297 Gene3D alpha/beta hydrolase 3 102 IPR029058 -
Stsc588g00008 297 FunFam Carboxypeptidase 199 294 - -
Stsc588g00008 297 Gene3D - 199 294 - -
Stsc588g00008 297 SUPERFAMILY alpha/beta-Hydrolases 7 295 IPR029058 -
Stsc588g00008 297 ProSitePatterns Serine carboxypeptidases, histidine active site. 264 281 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc588g00008 Stsc-Chr588 31999 34260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc588g00008 136 297 Calmodulin-binding Proteins AT2G22960 46.296 4.83e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc588g00008 K16296 - gmx:100790895 474.167