Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc585g00002 ATGGCAAATCATAACGAGGTATTCCTGAGTTTTAGAGGAGGAACGCGCTTCCAATTCACGGATCATCTCTATGGTGCTTTGCGCCGAAATGGCATCGACACCTTCAGAGACAATGATCGTTTGAACACAGGGGATAATCTAGATTCTGTTCTTATGGAGGCAATCGAGAATTGCAAAATGGCAATAGCGGTGTTGTGTGAGGACTATGCATCTTCCACATGGTGCCTTGATGAGTTAGTCAAGATCGTTGACTGTCACGAAAAGCATGGGAAGCAGGTTCTGCCAATTATTTACAGAGTGAAACCCTCAGATGTGTGGGAACAGAAGGGTTCCTATGAGAAAGCCTTTGCTGATAAACATGACAAGAGACAAAACTCTGAGAAGGTCAACGCATGGCGATTAGCTTTGTCCAAAGTAGAAAAGCTACCATGGGTGCATTGCACGGAGGACACGAATGAACCAGAATTTATCAAGAATATTGTTAGACACACTGCTGGTAGATTACCGTTGCCTGAGCCAATTGATTATGAAGTTGGATTGGATACTCGCTATGAAGAAGTAAAATCATTGCTAGATATTGAGTCTCATGACAATGTTCGCTTGTTGGGTATTTATGGAGCTGGTGGAATAGGCAAAACCAAATTGGCTAGATATCTATTCGACAAGATCAATATGCAGTTTGAAGCTTCATGTTTTCTTGGTAAAGTCAAGGAAAAATTTGAAAGTCTTGAAGGCTTAAAAATTCTGCAAAAGACACTTTTAGATGACATGGGTGAGGAGACAATAAGTCAGCTCGGAAGTGAATTCAAGGGGGGGAATGAAATCAAACGCAGGCTTCGCCACAAAAGAGTGCTTCTAGTTCTTGATGACGTGAATTCAATACCACAATTGGAATCACTTGCTGGAGGGCATGATTGGTTTGGTTCGGGCAGCAGAATCATCATAACAACAAGGGATACTGATGTGGTAGAGAAGCATGTGATGGGTGATGTTGTCAAAAATAATTATGAGGTGCAGGTGTTAAACGATGACGATTCCCTAGAACTATTTTCTTTGCATGCTTTCCATCGCAAGGAGCCTACAGAGGGTTTTGAAAATGTTTCAAGAAGAGCAATACGTTATGCAAAGGGCTTTCCGTTGGCTCTAGAAGTAATGGGCTCCAATTTAGGAAGTATTGCAAGTGTTGATGACTGGGAAGAGGAACTGAACAAGTATAGCATTGACTCAAGCATTCAACAAGTGCTTAAAAGAAGCTACGATGTCCTGTATGAACTTGACCAGAAAACTTTCTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGAGTATGTTAAAAGGATATTGAAAGCTTGCGACTTCTATCCAATTGTTCGAATGTTCATTAGTAAATGTCTCATCACTTTAAATCGAAATGGCTGCTTGGATATGCATGATCTAGTGCAAGACATGGGCAAGGAGATTGTAATGAATGAGCCATCTACAAACCCGGGTGAACGCAGCAGATTATGGTCTCATGAAGACGTTCTTCAAGTACTCAAAGATGGCACAGGAAGTAGTTCAATTGAGGGCATAATGCTTAACCCTTCTACACTTGAAGAAGTAAACTATGAGATTAATAATGCCTTTGATAAGATGGAGAACCTGAGAATTCTAATTGTTCGGAATACAAAATTTTCAAGAGGACCAAGTCATCTTCCAAATAGTTTGCGACTATTAGAGTGGAAAGGATATCCATCAGAGTCATTCCCAATTGATTTTCATCCCAAAAGAATTATTGACCTCAAGCTACCTCACAGTGCTCTTAAACTGGAAAAGTCATTTCAGATATTTGAGGATTTGACACTTATCAATCTCTCTCAGTGTCAATCCATTAAACAAATTCCCAATTTGTCTGGAGCAAAAAGCTTGAGAGTCTTCACACTTGACAGATGCCATAAGTTGGTGAAGTTTGATGAATCTGTTGGGGTTTTGCCAAATCTTGTGCATTTAAGTGCTTCAGAATGCAGGGTGCTTAGTAGTTTTGTGAGAGAAATGTATTTGCCGTCTCTCGAAGTGCTTTCATTTAACTTTTGTAAGAGACTTCAGAACTTCCCAGAAGTCACGAAAAAGATGGATAAGCCATTAAAGATTTACTTGGTAAATACTGCTATCAAGAAGTTCCCAGATTCCATTGGTAATCTGATAGGGCTTGAGCATATAGACATTTCAATATGCAAAGGACTCAGAGATCTACCAAGTAGCTTCTTCAAGTTGCCAAAACTTTTCTCATTCACAGTTGAGGGTTGTTATCCTCTTAGAGGATCATTGAAAAAGTTCAAAGAGAGCCATTCAACTTCAGATGACTACTGCCCAAATATAAGGATATTGAATTTCAGTGGTGCTAATCTATCAGATGAAAATCTTCATCCAATTTTTCAGGTTCTTCAAAAGATGGAACACATCAATGTATCACACAATGATTGTGTATCCCTCCCAAATTGCATTGAAAGATCTTTGCACATAAAAAGTATTGATGTGAGTTATTGCAAGAATCTTAAGACCATTCCAGAACTCCCATCAAGCATTCAAAAAGTTGATGCAAGATATTGCCTATCCTTATCTTCGGAATCCTCAGCCCAACTCTGGTCTAAGGTTTTACTAGAGCCGGAAAGAATTCAAATTGTGATGCCAAAAAAGGAGATTCCCAACAATTTGTTTGACAGCCATGGCAGTGAAGATATTCCTGTGTTCTGGGCTCGGCGAAAGTTCCCTGTTGTTGCTTTAGCATTCATGTTTGGGGAATCCACTGTAAGCAACAAAATCGCTGAGACAAGGAATGACATCCTAGGTTTGTTGCCTCAAATTGGTTCATCCATGTCCTACACTGTTCGCCTTAACTTGCTCATAGGCGGCAAACAAATTTTTCCAAAGGATTCCAAATACTTCAGTGTTGGGGAACATCATGTGCTACTCTTTGATCTGCGAGCTTTGTTCAGTCACCAAGAGTGGCATGATCTTGATGCTTATCTTGGAGTTGGAGACTATGAATGGAAATCCATTCAGGTTCAATGTGAATCACCTTTAACTCTCAGGCATTGGGGCGTGTATGTGTATAAGCATGAAACAAATTTGGATGACATTCAATTCAAGAATCCCTATCCTGAACCTCCACCGTCATCATCGTCGTCATCGGACTTGGTTCCGAAAAGAAGTCCGCAGCAACACCGGCAAAGTATGATGACACAGCTGGCACAAAATCTGAATCCAAGAGAATTACTTGGTGACTATTTGCCTCTTGTAGAGTTAACAGAAGTTCCGTCTTTTACAACTGTATTGCTGAGATCATTGAGGACTAGTAAGGCTGAAACGGGAGTGCCGGAATCTTCGGAGTATGGTGCAAGCTTAAAGCAAGAACATGAAGAATCTAATTGGAATGTTTCAAGGGTGATGGACCTGATAAAGGATGATGTGCCTAAACATGTTCTTGATGATCATTCTAATGAAATACGAGAAGCGCATCGATTTGTAGAAGAGTTTATGAGGGCACGCATGGAATTGTTGAAGGAAAAGGGCCAAGAGAGGATGGATATTGATATGGCAATCGTTTTAGAGCAACACTATCCTTCTGGTAATAATAAACCTCCTTCTCGTCGTTATTGGGGAAGACTAAACATAAAACATGAAGAGCTAACCGCCAAAGCAATTTTGAAGAAGACAACACAACTATCATGGAGATCTTGGAATCCCGCCGCCGGCAATGCAATAATGAAACAGAAGACAAGCTTTGTTCTCTTGAAATGCCTTAATAAGAAGCAGCAGCGTCATCCATCTAGAAAGGAAGCTTCAACCTCTTCTACTGGCAAAGGGCAAGGGGAATCATCATCATCATCAGAATTCGAAGAAGAAAATAATGATCCTGTGCTGGAAGAATTATTGAGCAAGATAGAGCAAGATGCTATGAAATTGAATCCATCATGCGGGAAGATGAAGGCATGTATTATCTTAGCTGATGAAGATGCTGAATTGATTTCTGATGAATATATACAGGAATTCATGCTAATCAGAGGAAAAGAAAACATGGAAATAAAAGGAATGTCACAATGGGGAGGGATGGAATTGGTTTTGTATCAAATGATGATGAGAGCATACGGATCAGTAGGGTCAGAGCCTCGCTTCGAGAAGACACCTTACGGGAAAATAAGGGTGGAGAACTAA 4197 0.4027 MANHNEVFLSFRGGTRFQFTDHLYGALRRNGIDTFRDNDRLNTGDNLDSVLMEAIENCKMAIAVLCEDYASSTWCLDELVKIVDCHEKHGKQVLPIIYRVKPSDVWEQKGSYEKAFADKHDKRQNSEKVNAWRLALSKVEKLPWVHCTEDTNEPEFIKNIVRHTAGRLPLPEPIDYEVGLDTRYEEVKSLLDIESHDNVRLLGIYGAGGIGKTKLARYLFDKINMQFEASCFLGKVKEKFESLEGLKILQKTLLDDMGEETISQLGSEFKGGNEIKRRLRHKRVLLVLDDVNSIPQLESLAGGHDWFGSGSRIIITTRDTDVVEKHVMGDVVKNNYEVQVLNDDDSLELFSLHAFHRKEPTEGFENVSRRAIRYAKGFPLALEVMGSNLGSIASVDDWEEELNKYSIDSSIQQVLKRSYDVLYELDQKTFLDIACFFKGEKWEYVKRILKACDFYPIVRMFISKCLITLNRNGCLDMHDLVQDMGKEIVMNEPSTNPGERSRLWSHEDVLQVLKDGTGSSSIEGIMLNPSTLEEVNYEINNAFDKMENLRILIVRNTKFSRGPSHLPNSLRLLEWKGYPSESFPIDFHPKRIIDLKLPHSALKLEKSFQIFEDLTLINLSQCQSIKQIPNLSGAKSLRVFTLDRCHKLVKFDESVGVLPNLVHLSASECRVLSSFVREMYLPSLEVLSFNFCKRLQNFPEVTKKMDKPLKIYLVNTAIKKFPDSIGNLIGLEHIDISICKGLRDLPSSFFKLPKLFSFTVEGCYPLRGSLKKFKESHSTSDDYCPNIRILNFSGANLSDENLHPIFQVLQKMEHINVSHNDCVSLPNCIERSLHIKSIDVSYCKNLKTIPELPSSIQKVDARYCLSLSSESSAQLWSKVLLEPERIQIVMPKKEIPNNLFDSHGSEDIPVFWARRKFPVVALAFMFGESTVSNKIAETRNDILGLLPQIGSSMSYTVRLNLLIGGKQIFPKDSKYFSVGEHHVLLFDLRALFSHQEWHDLDAYLGVGDYEWKSIQVQCESPLTLRHWGVYVYKHETNLDDIQFKNPYPEPPPSSSSSSDLVPKRSPQQHRQSMMTQLAQNLNPRELLGDYLPLVELTEVPSFTTVLLRSLRTSKAETGVPESSEYGASLKQEHEESNWNVSRVMDLIKDDVPKHVLDDHSNEIREAHRFVEEFMRARMELLKEKGQERMDIDMAIVLEQHYPSGNNKPPSRRYWGRLNIKHEELTAKAILKKTTQLSWRSWNPAAGNAIMKQKTSFVLLKCLNKKQQRHPSRKEASTSSTGKGQGESSSSSEFEEENNDPVLEELLSKIEQDAMKLNPSCGKMKACIILADEDAELISDEYIQEFMLIRGKENMEIKGMSQWGGMELVLYQMMMRAYGSVGSEPRFEKTPYGKIRVEN 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc585g00002 1398 Gene3D - 165 330 IPR027417 -
Stsc585g00002 1398 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 785 IPR044974 GO:0006952
Stsc585g00002 1398 MobiDBLite consensus disorder prediction 1264 1300 - -
Stsc585g00002 1398 MobiDBLite consensus disorder prediction 1056 1073 - -
Stsc585g00002 1398 Coils Coil 532 552 - -
Stsc585g00002 1398 SUPERFAMILY "Winged helix" DNA-binding domain 410 514 IPR036390 -
Stsc585g00002 1398 ProSiteProfiles TIR domain profile. 3 168 IPR000157 GO:0007165
Stsc585g00002 1398 Pfam NB-ARC domain 184 422 IPR002182 GO:0043531
Stsc585g00002 1398 Pfam TIR domain 7 164 IPR000157 GO:0007165
Stsc585g00002 1398 Gene3D - 2 164 IPR035897 -
Stsc585g00002 1398 SUPERFAMILY L domain-like 537 873 - -
Stsc585g00002 1398 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 141 IPR035897 -
Stsc585g00002 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 433 IPR027417 -
Stsc585g00002 1398 Gene3D - 340 423 IPR042197 -
Stsc585g00002 1398 MobiDBLite consensus disorder prediction 1273 1291 - -
Stsc585g00002 1398 FunFam Disease resistance protein (TIR-NBS-LRR class) 1 168 - -
Stsc585g00002 1398 MobiDBLite consensus disorder prediction 1042 1073 - -
Stsc585g00002 1398 Gene3D Ribonuclease Inhibitor 711 877 IPR032675 -
Stsc585g00002 1398 Gene3D Ribonuclease Inhibitor 517 710 IPR032675 -
Stsc585g00002 1398 PRINTS Disease resistance protein signature 201 216 - -
Stsc585g00002 1398 PRINTS Disease resistance protein signature 375 389 - -
Stsc585g00002 1398 PRINTS Disease resistance protein signature 278 292 - -
Stsc585g00002 1398 PRINTS Disease resistance protein signature 679 695 - -
Stsc585g00002 1398 SMART till_3 4 142 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc585g00002 Stsc-Chr585 3654 11408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc585g00002 19 776 WRKY Transcription Factor Family AT4G12020 31.298 1.13e-89 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc585g00002 - - ahf:112707726 1807.34