Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc57g00019 ATGACCTCATATGAGCTTCCTGATGGCCAGATAATTGAAATTGGATCTGACAGATTCAAGATTCCTGATATTCTCTTTAATCCATCCCTAGTTCAGACAATACCGGGCATGGAGAGCTTTGCTGAAATAGCTCCTTCAGTTCGTGGTCTTCCTAAAATGGTTATAGATAGTATTAATAGGTGTGATGTTGACATCCGAAGAGAACTCTTTGGTAGCATAATGCTTACTGGCGGGACAGCTTCAATGCAACAATTGAAGGAACGTGTTGAGAAGGAGTTACTTGAGGAGTCCCCTCAGGCTGCTAGGGTAAAAGTATTTGCGAGTGGAAATGCAACTGAAAGAAGGTTCAGTGTTTGGATTGGGGGAAGCATACTGGCGTCTCTAGGCTCCTTCCAGCAGATGTGGTTTTCCAAGTCTGAGTATGAAGAACAAGGTGCTTCCTACATTCAAAGAAAGTGCCCTTGA 465 0.4344 MTSYELPDGQIIEIGSDRFKIPDILFNPSLVQTIPGMESFAEIAPSVRGLPKMVIDSINRCDVDIRRELFGSIMLTGGTASMQQLKERVEKELLEESPQAARVKVFASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEQGASYIQRKCP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc57g00019 154 Gene3D - 114 152 - -
Stsc57g00019 154 PANTHER ACTIN 2 147 IPR004000 -
Stsc57g00019 154 SUPERFAMILY Actin-like ATPase domain 3 153 IPR043129 -
Stsc57g00019 154 Pfam Actin 2 153 IPR004000 -
Stsc57g00019 154 Gene3D Actin; Chain A, domain 4 1 29 - -
Stsc57g00019 154 Gene3D - 30 113 - -
Stsc57g00019 154 FunFam actin-related protein 4 96 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc57g00019 Stsc-Chr57 152374 154297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc57g00019 3 153 Cytoskeleton Gene Families AT3G12110 49.007 9.00e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc57g00019 K11340 - gmx:100819549 278.87