Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc578g00006 ATGGCAGTGATCTTGATACAAAGCATATACGCCGTGATGTTTCTTCTCTCGAAAGCAGCATTTGACAATGGAATCAACAACTTCATCTTCGTATTTTACAGGCAGGCCCTAGCCACCGTTTTCCTCGCTCCTTTTGCTTTCTTCCTCGAACGCAAAACTGCACCACCTTTGTCATTTCTCACCATGTGCAAGATCTTCTTCCTTTCTCTCTTCGGGATTACGGGGAGCTTGGATGTATATGGTATTGCGCTTATATACACTTCGCCTACTTTGGCTTCTGCTACCACTAACTGCCTTCCAGCCATCACCTTCTTCTTGGCCCTCTTACTCAGGATTGAAGTTCTGAAAGTAAAGACAGCAGCAGGTGGTGCTAAAATGGTAGGTGTGGTGGCATGCTTGTGTGGAGCCGCAACACTTGCTTTCTACAAAGGTCCTCATTTTCAGCTTTCAGGGTACCATCAACTAATACATCAATCTCATCATCTTCAACCATCTTCTTCTTCTTCTTCTTGGATAAAGGGTTGCTTCCTCATGCTCCTCTCTAACTTCCTTTTTGGGATTTGGCTAGTGCTACAGGGTTTTGTGGTGAAAGGGTACCCTTCAAAGCTGCGTCTTACAACACTTCAGTGTTTGTGTAGCTCAATTCAGTCTTTCTGCATTGCATATGGCTTAGAGAGAAACATTGAGCAATGGAAGTTGAGTTGGAATGTCTCACTCATCGCCGTACTATACTGTGGAATAATGGTGACGGGTGTTACGTATTACATACAAACATGGGTGATAGAGAAGAAAGGGCCAGTGTTTCTCGCCATGTCAACGCCATTAGCTTTCATAATCACCCTCCTCTCCTCGGCAATTCTCCTCCGCCAGATTGTAACTTTAGGAAGCATTTTAGGTGGGGTCCTATTGGTTATAGGACTGTATAGCGTTCTGTGGGGTAAGACAAGAGAGGAAATGCCAAAAGTCACTGACGACTTGGAGCTTGGATCGGAGCACCACCCACCGCCGCCGCAATCACAATCAACTTGA 1029 0.4538 MAVILIQSIYAVMFLLSKAAFDNGINNFIFVFYRQALATVFLAPFAFFLERKTAPPLSFLTMCKIFFLSLFGITGSLDVYGIALIYTSPTLASATTNCLPAITFFLALLLRIEVLKVKTAAGGAKMVGVVACLCGAATLAFYKGPHFQLSGYHQLIHQSHHLQPSSSSSSWIKGCFLMLLSNFLFGIWLVLQGFVVKGYPSKLRLTTLQCLCSSIQSFCIAYGLERNIEQWKLSWNVSLIAVLYCGIMVTGVTYYIQTWVIEKKGPVFLAMSTPLAFIITLLSSAILLRQIVTLGSILGGVLLVIGLYSVLWGKTREEMPKVTDDLELGSEHHPPPPQSQST 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc578g00006 342 MobiDBLite consensus disorder prediction 323 342 - -
Stsc578g00006 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 316 - -
Stsc578g00006 342 PANTHER WAT1-RELATED PROTEIN 1 321 IPR030184 GO:0016020|GO:0022857
Stsc578g00006 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 33 141 - -
Stsc578g00006 342 Pfam EamA-like transporter family 3 128 IPR000620 GO:0016020
Stsc578g00006 342 Pfam EamA-like transporter family 173 311 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc578g00006 Stsc-Chr578 24302 26862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc578g00006 1 245 Nodulin-like Gene Family AT5G64700 60.558 6.53e-92 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc578g00006 - - ccaj:109799350 464.536