Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc565g00001 ATGGAACAAGAGATGGTGGTGCTGTGGTGGGTGAAGGCTGTGTGCTTGAGTTGCCTAGTGGTGTTGGTGGCGCTGAGGGTGGCGCTGCTCCTCTGGTGGAGACCTATGAGGATTCAAGCCCATTTCTCAACACAAGGAATCAGAGGACCTCCTTATCGCTTCTTCATTGGTAACGTTAAGGAGTTAGTCTCCATGATGCTCAAGGCTTCCTCTCAACCCATGGCTTCCTCTCACAACATTCTCCCTCGCGTCCTTTCCTTCTACCATCACTGGAAGAAAATCTATGGTTCAACATTCATAGTATGGTTTGGACCGACGGTTCGACTCACGGTGTCTGATCCAGACCTTATCCGTGAAATCTTCACATCCAAGTCAGAATTGTACGAGAAGAACGACGCTCCCCCTCTTGTCAAGCAGCTTGAAGGCGATGGACTCCTCAACATCAAAGGAGAGAAATGGTCTCACCACCGCAGAATCATCTCTCCCACTTTTCACATGGAAAATCTCAAGCTCTTGATACCGGCCATGGGAACAAGCGTGCTTCACATGTTGGACAAGTGGTCGCAGAAAGCTGAGGTGGAGATCGAAGTTTCCGAGTTTTTTCATAACTTAACGGAAGACGTTATCACGAAGATAGCATTCGGAAGCAGCTACGAAGATGGAAGAGCCATCTTTCGGCTTCAATCCCAACAAATGCTGTTAGCCGCCGATGCTTTCCAAAAAGTCTTCATTCCAGGTTACAGATTTTTTCCAACAAGGAGGAATATAAAATCATGGAAATTGGAGAAGAAGATAAGGAGATCGTTGGTGAGGTTGATAGAGAAGAGGAGAGAGAGCGGTAATAACAAAGGGGAAGGGGCGAAGGACTTGTTGGGGCTGATGATAGAAGCGTCGATGGGGATGGGGAGGGGTAAGAATGGGAATAGTGCGAATGTGACGGTGGATGACATAGTGGAGGAGTGCAAGACGTTCTTCTTTGCGGGGAAACAAACCACATCCAACATGCTGACCTGGACAACCATCCTTCTCGCTATGCACCCACACTGGCAGGTGCAGGCACGTGACGAGGTCCTCTCTATCTGTGGATCACGTGACCTCCCCACCAAGGACCATGTTGCCAAGCTCAAGACGCTGAGCATGATAGTGAACGAGTCCATAAGGCTATACCCACCCACAATCGCCACTCTAAGGCGGGCAAAAGCTGACGTGGACTTGGGCAGTTACAAGATACCACGTGGGACAGAGCTGTTGATCCCAATCCTGGCCGTCCATCACGATCAGGCGATGTGGGGCAACGACGTCAACGAATTCAATCCTGGCCGCTTCTCGGAGGGGGTTGCCCGAGCGGCAAAGCATCCAGTGGCGTTCATTCCATTCGGTCTAGGTGTTCGCACATGCATCGGACAAAACCTCGCCGTTCTACAAACGAAGCTAGCCCTGGCAATCATACTGCAGCGTTTTAGTTTCAGCCACTCTCCAAAGATCAAGATCAACGCTCCTGATTCACTTAGACGGGTTTGCACTTTGCACCTTTCCTCTGTGTGCAAGGTTCTGTAA 1557 0.5003 MEQEMVVLWWVKAVCLSCLVVLVALRVALLLWWRPMRIQAHFSTQGIRGPPYRFFIGNVKELVSMMLKASSQPMASSHNILPRVLSFYHHWKKIYGSTFIVWFGPTVRLTVSDPDLIREIFTSKSELYEKNDAPPLVKQLEGDGLLNIKGEKWSHHRRIISPTFHMENLKLLIPAMGTSVLHMLDKWSQKAEVEIEVSEFFHNLTEDVITKIAFGSSYEDGRAIFRLQSQQMLLAADAFQKVFIPGYRFFPTRRNIKSWKLEKKIRRSLVRLIEKRRESGNNKGEGAKDLLGLMIEASMGMGRGKNGNSANVTVDDIVEECKTFFFAGKQTTSNMLTWTTILLAMHPHWQVQARDEVLSICGSRDLPTKDHVAKLKTLSMIVNESIRLYPPTIATLRRAKADVDLGSYKIPRGTELLIPILAVHHDQAMWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFSHSPKIKINAPDSLRRVCTLHLSSVCKVL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc565g00001 518 SUPERFAMILY Cytochrome P450 49 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 495 - -
Stsc565g00001 518 Pfam Cytochrome P450 85 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 Gene3D Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc565g00001 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Stsc565g00001 518 FunFam Cytochrome P450 734A1 32 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc565g00001 Stsc-Chr565 13734 16796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc565g00001 1 503 Cytochrome P450 AT2G26710 70.760 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc565g00001 K15639 - gmx:100780027 800.045