Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc55g00024 ATGGAGGTTGAGATTGATGGCTCTAATAATGGGGAGGCAATAGAAAATGCTGCCATGGCTGAGGAGGATTGTAGCACTGATGAAGGAAACAATGCAGATGAAGCAAACAACACTGATGAAGGGAACAACGCTGACGAAGGAAACAATGGTGATGATGGAAACAACATGGATGAAAGGGCTATTGTGCCAGCTCAAAGCCAAGGTCAAGATGCGACTCCAGGTTCTGCTGGAGGGGCCATAACCCAAGCGGTTCTCCCGCTTCCGGTACCAATTGTTTCGCCTGTCGAACCTTACGTGGGTCAGGAGTTTGAGTCTGAAATGGAAGCACACGCATTCTACAATGCTTATGCCACTAGTGTTGGATTCATCGTACGAGTTAGTAAACTCTCGCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGAGTGACAAGCGCGAAAATGTTATACGGCAAAGGGCAGAGACAAGGGTTGGTTGCAAAGCAATGATAATGGTAAGGAAAGTAAAATCTGGTAGCTGGGTTGTAACACGGTTTGTGAAGGACCACGCACATCCTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGGCGAACGTGATAGAATTCGGGAACTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTGCCACCTATAAAAGACATCTTGAATTGATACTCGAGCACATTGATGAGTACAACGAGAGCCTCTCGAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACCCTTTAA 855 0.4526 MEVEIDGSNNGEAIENAAMAEEDCSTDEGNNADEANNTDEGNNADEGNNGDDGNNMDERAIVPAQSQGQDATPGSAGGAITQAVLPLPVPIVSPVEPYVGQEFESEMEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMSDKRENVIRQRAETRVGCKAMIMVRKVKSGSWVVTRFVKDHAHPLAGPGGGRRDFIYEQYPGERDRIRELNQQLTAEKKRSATYKRHLELILEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc55g00024 284 Coils Coil 251 271 - -
Stsc55g00024 284 MobiDBLite consensus disorder prediction 1 58 - -
Stsc55g00024 284 Pfam FAR1 DNA-binding domain 112 197 IPR004330 -
Stsc55g00024 284 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 272 - -
Stsc55g00024 284 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc55g00024 Stsc-Chr55 123850 126107 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc55g00024 FAR1 4.5e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc55g00024 - - adu:107476765 471.085